RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 PURAQ00577 322 aaKnown RBP4.91□□□□□ -1.62
VPS41-212ENST00000482217 TMEM62Q0P6H9 643 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 TCIRG1Q13488 830 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 PCBP1Q15365 356 aaKnown RBP eCLIP4.91□□□□□ -1.62
VPS41-212ENST00000482217 PUM3Q15397 648 aaKnown RBP4.91□□□□□ -1.62
VPS41-212ENST00000482217 PKN3Q6P5Z2 889 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 MAATS1Q7Z4T9 603 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 STRA8Q7Z7C7 330 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 SNX32Q86XE0 403 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 ZNF354CQ86Y25 554 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 SIRT2Q8IXJ6 389 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 NDUFAF2Q8N183 169 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 CHST14Q8NCH0 376 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 PJA1Q8NG27 643 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 UHMK1Q8TAS1 419 aaKnown RBP4.91□□□□□ -1.62
VPS41-212ENST00000482217 PHOSPHO1Q8TCT1 267 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 FBXO41Q8TF61 875 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 LEO1Q8WVC0 666 aaPredicted RBP4.91□□□□□ -1.62
VPS41-212ENST00000482217 EIF2AK1Q9BQI3 630 aaKnown RBP4.91□□□□□ -1.62
VPS41-212ENST00000482217 HERPUD2Q9BSE4 406 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 AP5M1Q9H0R1 490 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 NSUN3Q9H649 340 aaKnown RBP4.91□□□□□ -1.62
VPS41-212ENST00000482217 DCP1AQ9NPI6 582 aaPredicted RBP4.91□□□□□ -1.62
VPS41-212ENST00000482217 AASDHPPTQ9NRN7 309 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 CBLCQ9ULV8 474 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 ZNF652Q9Y2D9 606 aa4.91□□□□□ -1.62
VPS41-212ENST00000482217 OR14I1A6ND48 311 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 ZNF561-AS1K7EIQ3 104 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 ABLIM1O14639 778 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 TADA3O75528 432 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 ZBTB7AO95365 584 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 PDE6AP16499 860 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 RENBPP51606 427 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 JAG1P78504 1218 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 FZD5Q13467 585 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 SLC9A5Q14940 896 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 SEPT7Q16181 437 aaKnown RBP4.9□□□□□ -1.63
VPS41-212ENST00000482217 GFOD2Q3B7J2 385 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 DNAJC21Q5F1R6 531 aaKnown RBP4.9□□□□□ -1.63
VPS41-212ENST00000482217 WDR45BQ5MNZ6 344 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 JAKMIP3Q5VZ66 844 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 STEAP3Q658P3 488 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 MZT2AQ6P582 158 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 HHIPL2Q6UWX4 724 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 OTOP1Q7RTM1 612 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 IFNL2Q8IZJ0 200 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 NLGN4XQ8N0W4 816 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 OR8H2Q8N162 312 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 AFAP1L2Q8N4X5 818 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 C2orf69Q8N8R5 385 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 OR2W6PQ8NHA6 318 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 PIP4K2CQ8TBX8 421 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 CDHR1Q96JP9 859 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 DIRC2Q96SL1 478 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 YIPF4Q9BSR8 244 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 SARGQ9BW04 601 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 RHOBTB2Q9BYZ6 727 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 TRIM8Q9BZR9 551 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 PDGFDQ9GZP0 370 aaPredicted RBP4.9□□□□□ -1.63
VPS41-212ENST00000482217 SMOC1Q9H4F8 434 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 B4GALT6Q9UBX8 382 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 ABCF2Q9UG63 623 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 MCM8Q9UJA3 840 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 DSEQ9UL01 958 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 SYNRGQ9UMZ2 1314 aa4.9□□□□□ -1.63
VPS41-212ENST00000482217 HRKO00198 91 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 TRAF5O00463 557 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 NKRFO15226 690 aaKnown RBP eCLIP4.89□□□□□ -1.63
VPS41-212ENST00000482217 PEX10O60683 326 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 GAS7O60861 476 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 EYA4O95677 639 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 AMY2AP04746 511 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 NBPF7P0C2Y1 421 aaPredicted RBP4.89□□□□□ -1.63
VPS41-212ENST00000482217 COL6A2P12110 1019 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 TYRP1P17643 537 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 AMY2BP19961 511 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 OAS2P29728 719 aaKnown RBP4.89□□□□□ -1.63
VPS41-212ENST00000482217 ECE1P42892 770 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 RAP1GAPP47736 663 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 MAPKAPK2P49137 400 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 GALK1P51570 392 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 JAM2P57087 298 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 NUCB1Q02818 461 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 CHAF1AQ13111 956 aaPredicted RBP4.89□□□□□ -1.63
VPS41-212ENST00000482217 PICALMQ13492 652 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 CNGB1Q14028 1251 aaPredicted RBP4.89□□□□□ -1.63
VPS41-212ENST00000482217 GALEQ14376 348 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 SART3Q15020 963 aaKnown RBP4.89□□□□□ -1.63
VPS41-212ENST00000482217 FIGNQ5HY92 759 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 ADGRF1Q5T601 910 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 TSHZ3Q63HK5 1081 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 OLFML2BQ68BL8 750 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 ARHGAP36Q6ZRI8 547 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 TOGARAM2Q6ZUX3 1019 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 SYDE1Q6ZW31 735 aaPredicted RBP4.89□□□□□ -1.63
VPS41-212ENST00000482217 PNMA8AQ86V59 439 aaPredicted RBP4.89□□□□□ -1.63
VPS41-212ENST00000482217 OSTM1Q86WC4 334 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 TRIM48Q8IWZ4 208 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 LMNTD2Q8IXW0 634 aa4.89□□□□□ -1.63
VPS41-212ENST00000482217 CISD2Q8N5K1 135 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms