RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 MYMKA6NI61 221 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 MAGEB2O15479 319 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 USO1O60763 962 aaKnown RBP13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 GNAT1P11488 350 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 TBC1D8BQ0IIM8 1120 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 ITGA7Q13683 1181 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 EMC2Q15006 297 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 ARSHQ5FYA8 562 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 MARCH8Q5T0T0 291 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 RBM43Q6ZSC3 357 aaKnown RBP13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 C7orf31Q8N865 590 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 SPATA20Q8TB22 786 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 SLC7A3Q8WY07 619 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 SYAP1Q96A49 352 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 DNAJC19Q96DA6 116 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 STARD7Q9NQZ5 370 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 HDAC6Q9UBN7 1215 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 SIP14410 1827 aa13.94□□□□□ -0.18
TRAPPC12-218ENST00000479897 C17orf102A2RUQ5 167 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 TRAK2O60296 914 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 TFRCP02786 760 aaKnown RBP13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 MYCNP04198 464 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 SSBP05455 408 aaKnown RBP eCLIP13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 ZNF131P52739 623 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 POLGP54098 1239 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 RTP1P59025 263 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 DPYDQ12882 1025 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 MAPK7Q13164 816 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 SNX17Q15036 470 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 CCDC183Q5T5S1 534 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 NT5DC1Q5TFE4 455 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 C1orf53Q5VUE5 145 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 MTHFD1LQ6UB35 978 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 GRAMD1CQ8IYS0 662 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 DDX12PQ92771 950 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 SH2D3AQ9BRG2 576 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 REEP2Q9BRK0 252 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 BMP2KQ9NSY1 1161 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 TUBE1Q9UJT0 475 aa13.93□□□□□ -0.18
TRAPPC12-218ENST00000479897 SMIM35A0A1B0GVV1 85 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 PVALEFA0A1B0GWK0 134 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 ARVCFO00192 962 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 RPLP2P05387 115 aaKnown RBP13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 AFMP43652 599 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 CUL4BQ13620 913 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 GIT2Q14161 759 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 DHX8Q14562 1220 aaKnown RBP13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 UNC13DQ70J99 1090 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 TRMT1LQ7Z2T5 733 aaKnown RBP13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 DAW1Q8N136 415 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 RETREG2Q8NC44 543 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 TRAPPC12Q8WVT3 735 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 TCP11Q8WWU5 503 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 STAMQ92783 540 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 KIFAP3Q92845 792 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 DRC1Q96MC2 740 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 SETD4Q9NVD3 440 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 TMEM63CQ9P1W3 806 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 PCDHA2Q9Y5H9 948 aa13.92□□□□□ -0.18
TRAPPC12-218ENST00000479897 MROH7Q68CQ1 1323 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 KLRC4O43908 158 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 KLRC1P26715 233 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 SARSP49591 514 aaKnown RBP13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 CDK7P50613 346 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 IGBP1P78318 339 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 ASIC1P78348 528 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 EHHADHQ08426 723 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 PNOCQ13519 176 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 HIC1Q14526 733 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 KCNB1Q14721 858 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 IER5Q5VY09 327 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 GDF6Q6KF10 455 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 TAF2Q6P1X5 1199 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 UBE2Q1Q7Z7E8 422 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 RPAINQ86UA6 219 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 KCNN1Q92952 543 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 GSDMAQ96QA5 445 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 C17orf75Q9HAS0 396 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 SEL1LQ9UBV2 794 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 TANC1Q9C0D5 1861 aa13.91□□□□□ -0.18
TRAPPC12-218ENST00000479897 HIP1RO75146 1068 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 TBCAO75347 108 aaKnown RBP13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 SMC2O95347 1197 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 KRT18P05783 430 aaKnown RBP13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 GAP43P17677 238 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 TMOD1P28289 359 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 ARL2P36404 184 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 COL13A1Q5TAT6 717 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 CAVIN1Q6NZI2 390 aaKnown RBP13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 DYMQ7RTS9 669 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 SERINC5Q86VE9 423 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 CCDC65Q8IXS2 484 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 ZNF710Q8N1W2 664 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 DIS3LQ8TF46 1054 aaKnown RBP13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 CTAGE1Q96RT6 745 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 BLZF1Q9H2G9 400 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 PARVGQ9HBI0 331 aa13.9□□□□□ -0.18
TRAPPC12-218ENST00000479897 OLFML3Q9NRN5 406 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms