RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 NPEPPSP55786 919 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 MRPS6P82932 125 aaKnown RBP14.64□□□□□ -0.07
TOP3A-205ENST00000477508 HYIQ5T013 277 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 PLA2G4FQ68DD2 849 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 PSRC1Q6PGN9 363 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-205ENST00000477508 KIAA0319LQ8IZA0 1049 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 USP38Q8NB14 1042 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 TCP11Q8WWU5 503 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 CALML4Q96GE6 196 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 CEP89Q96ST8 783 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 DHX33Q9H6R0 707 aaKnown RBP14.64□□□□□ -0.07
TOP3A-205ENST00000477508 FBXO2Q9UK22 296 aaPredicted RBP14.64□□□□□ -0.07
TOP3A-205ENST00000477508 KIAA1024Q9UPX6 916 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 SQORQ9Y6N5 450 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 EVPLQ92817 2033 aa14.64□□□□□ -0.07
TOP3A-205ENST00000477508 MARCKSP29966 332 aaPredicted RBP14.63□□□□□ -0.07
TOP3A-205ENST00000477508 TXLNAP40222 546 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 RARRES1P49788 294 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 KRT85P78386 507 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 POTEGQ6S5H5 508 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 CABP7Q86V35 215 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 LINC01465Q8N7H1 131 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 ZNF579Q8NAF0 562 aaKnown RBP14.63□□□□□ -0.07
TOP3A-205ENST00000477508 PIGOQ8TEQ8 1089 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 SCLYQ96I15 445 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 MMTAG2Q9BU76 263 aaKnown RBP14.63□□□□□ -0.07
TOP3A-205ENST00000477508 CCSER1Q9C0I3 900 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 MTIF3Q9H2K0 278 aaKnown RBP14.63□□□□□ -0.07
TOP3A-205ENST00000477508 SUGCTQ9HAC7 445 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 DDX19AQ9NUU7 478 aaKnown RBP14.63□□□□□ -0.07
TOP3A-205ENST00000477508 TRPV2Q9Y5S1 764 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 TANC1Q9C0D5 1861 aa14.63□□□□□ -0.07
TOP3A-205ENST00000477508 LOXHD1Q8IVV2 1947 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 ARHGEF35A5YM69 484 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 TMEM150BA6NC51 233 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 PP2D1A8MPX8 630 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 ZBTB39O15060 712 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 ASAP2O43150 1006 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 CHRNA1P02708 482 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 CXCL10P02778 98 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 CTSHP09668 335 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 ACTN1P12814 892 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 CDC25AP30304 524 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 DNM1Q05193 864 aaKnown RBP14.62□□□□□ -0.07
TOP3A-205ENST00000477508 MGAT3Q09327 533 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 FOXD4L6Q3SYB3 417 aaPredicted RBP14.62□□□□□ -0.07
TOP3A-205ENST00000477508 ODR4Q5SWX8 454 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 TRAF7Q6Q0C0 670 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 FOXD4L3Q6VB84 417 aaPredicted RBP14.62□□□□□ -0.07
TOP3A-205ENST00000477508 CHRDL2Q6WN34 429 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 MCPH1Q8NEM0 835 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 ZBTB10Q96DT7 871 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 CELF4Q9BZC1 486 aaKnown RBP14.62□□□□□ -0.07
TOP3A-205ENST00000477508 CSRNP2Q9H175 543 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 PRO3102Q9H379 93 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 RCOR1Q9UKL0 485 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 AKT3Q9Y243 479 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 CDY2AQ9Y6F7 541 aa14.62□□□□□ -0.07
TOP3A-205ENST00000477508 CUTAO60888 179 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 EFCAB14O75071 495 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 EYA4O95677 639 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 FGBP02675 491 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 CLCN3P51790 818 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 CRYBB1P53674 252 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-205ENST00000477508 EMC2Q15006 297 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 ZRSR1Q15695 479 aaKnown RBP14.61□□□□□ -0.07
TOP3A-205ENST00000477508 LRRC71Q8N4P6 559 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 RASSF8Q8NHQ8 419 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 PSPC1Q8WXF1 523 aaKnown RBP14.61□□□□□ -0.07
TOP3A-205ENST00000477508 MTRQ99707 1265 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 SH2D3AQ9BRG2 576 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 SCAND2PQ9GZW5 306 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-205ENST00000477508 ATP6V0A4Q9HBG4 840 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 SUCLA2Q9P2R7 463 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-205ENST00000477508 CCDC39Q9UFE4 941 aa14.61□□□□□ -0.07
TOP3A-205ENST00000477508 NBNO60934 754 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 BAIAP3O94812 1187 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 NCLP19338 710 aaKnown RBP14.6□□□□□ -0.07
TOP3A-205ENST00000477508 ME1P48163 572 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 GRIN1Q05586 938 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 MXD4Q14582 209 aaPredicted RBP14.6□□□□□ -0.07
TOP3A-205ENST00000477508 MBTPS1Q14703 1052 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 ECM1Q16610 540 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 TMEM119Q4V9L6 283 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 PLEKHG4Q58EX7 1191 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 TMEM240Q5SV17 173 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 CNKSR3Q6P9H4 555 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 DEFB128Q7Z7B8 93 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 ZNF410Q86VK4 478 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 TDHQ8IZJ6 230 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 SEPT8Q92599 483 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 APBB2Q92870 758 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 BHMT2Q9H2M3 363 aa14.6□□□□□ -0.07
TOP3A-205ENST00000477508 RBM19Q9Y4C8 960 aaKnown RBP14.6□□□□□ -0.07
TOP3A-205ENST00000477508 ARID2Q68CP9 1835 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 ABHD14A-ACY1A0A1B0GW23 586 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 GPR32O75388 356 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 VTNP04004 478 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 CYP11B2P19099 503 aa14.59□□□□□ -0.07
TOP3A-205ENST00000477508 EPHB4P54760 987 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms