RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 JAK3P52333 1124 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 ST3GAL1Q11201 340 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 BTG3Q14201 252 aaPredicted RBP18.25■□□□□ 0.51
COL1A1-205ENST00000476387 ODR4Q5SWX8 454 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 CMTR2Q8IYT2 770 aaKnown RBP18.25■□□□□ 0.51
COL1A1-205ENST00000476387 FAM167AQ96KS9 214 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 LLPHQ9BRT6 129 aaKnown RBP18.25■□□□□ 0.51
COL1A1-205ENST00000476387 PLVAPQ9BX97 442 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 LMAN2LQ9H0V9 348 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 NSUN3Q9H649 340 aaKnown RBP18.25■□□□□ 0.51
COL1A1-205ENST00000476387 DISC1Q9NRI5 854 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 CEP131Q9UPN4 1083 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 MYO7AQ13402 2215 aa18.25■□□□□ 0.51
COL1A1-205ENST00000476387 COL19A1Q14993 1142 aa18.24■□□□□ 0.51
COL1A1-205ENST00000476387 MBOAT7Q96N66 472 aa18.24■□□□□ 0.51
COL1A1-205ENST00000476387 ERVK-5Q9HDB9 667 aa18.24■□□□□ 0.51
COL1A1-205ENST00000476387 RNF216Q9NWF9 866 aaPredicted RBP18.24■□□□□ 0.51
COL1A1-205ENST00000476387 GABBR1Q9UBS5 961 aa18.24■□□□□ 0.51
COL1A1-205ENST00000476387 MAGEB2O15479 319 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 NCK2O43639 380 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 CCNT1O60563 726 aaKnown RBP18.23■□□□□ 0.51
COL1A1-205ENST00000476387 MMP1P03956 469 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 KCNA5P22460 613 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 HMGN5P82970 282 aaKnown RBP18.23■□□□□ 0.51
COL1A1-205ENST00000476387 NR5A1Q13285 461 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 TCEAL5Q5H9L2 206 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 MIER3Q7Z3K6 550 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 ZNF710Q8N1W2 664 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 ETNPPLQ8TBG4 499 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 GJA10Q969M2 543 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 TMX1Q9H3N1 280 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 UNC45AQ9H3U1 944 aa18.23■□□□□ 0.51
COL1A1-205ENST00000476387 GPR182O15218 404 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 SLC37A4O43826 429 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 RPS6KA5O75582 802 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 PSMD10O75832 226 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 SARSP49591 514 aaKnown RBP18.22■□□□□ 0.51
COL1A1-205ENST00000476387 CRYBB1P53674 252 aaPredicted RBP18.22■□□□□ 0.51
COL1A1-205ENST00000476387 NFX1Q12986 1120 aaKnown RBP18.22■□□□□ 0.51
COL1A1-205ENST00000476387 SAFBQ15424 915 aaKnown RBP eCLIP18.22■□□□□ 0.51
COL1A1-205ENST00000476387 TMEM266Q2M3C6 531 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 PUS10Q3MIT2 529 aaKnown RBP18.22■□□□□ 0.51
COL1A1-205ENST00000476387 NAALADL2Q58DX5 795 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 PPP4R3AQ6IN85 833 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 TRMT1LQ7Z2T5 733 aaKnown RBP18.22■□□□□ 0.51
COL1A1-205ENST00000476387 DIS3L2Q8IYB7 885 aaKnown RBP18.22■□□□□ 0.51
COL1A1-205ENST00000476387 RDM1Q8NG50 284 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 NEK9Q8TD19 979 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 P2RX5Q93086 422 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 PABPC5Q96DU9 382 aaKnown RBP18.22■□□□□ 0.51
COL1A1-205ENST00000476387 C1orf112Q9NSG2 853 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 GINS2Q9Y248 185 aa18.22■□□□□ 0.51
COL1A1-205ENST00000476387 NOC2LQ9Y3T9 749 aaKnown RBP18.22■□□□□ 0.51
COL1A1-205ENST00000476387 GRM6O15303 877 aa18.21■□□□□ 0.51
COL1A1-205ENST00000476387 MARCH6O60337 910 aa18.21■□□□□ 0.51
COL1A1-205ENST00000476387 METTL13Q8N6R0 699 aa18.21■□□□□ 0.51
COL1A1-205ENST00000476387 FAM184AQ8NB25 1140 aa18.21■□□□□ 0.51
COL1A1-205ENST00000476387 TMEM40Q8WWA1 233 aa18.21■□□□□ 0.51
COL1A1-205ENST00000476387 C8orf76Q96K31 380 aa18.21■□□□□ 0.51
COL1A1-205ENST00000476387 CDHR5Q9HBB8 845 aa18.21■□□□□ 0.51
COL1A1-205ENST00000476387 RGS18Q9NS28 235 aa18.21■□□□□ 0.51
COL1A1-205ENST00000476387 LRFN2Q9ULH4 789 aa18.21■□□□□ 0.51
COL1A1-205ENST00000476387 ST3GAL5Q9UNP4 418 aa18.21■□□□□ 0.51
COL1A1-205ENST00000476387 MRPL42Q9Y6G3 142 aaKnown RBP18.21■□□□□ 0.51
COL1A1-205ENST00000476387 DENND3A2RUS2 1198 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 FAM205CA6NFA0 338 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 BTBD18B2RXH4 712 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 GPR32O75388 356 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 OATP04181 439 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 TMOD1P28289 359 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 PRKCEQ02156 737 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 KIZQ2M2Z5 673 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 EARS2Q5JPH6 523 aaKnown RBP18.2■□□□□ 0.5
COL1A1-205ENST00000476387 SLC24A5Q71RS6 500 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 LINC01465Q8N7H1 131 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.2■□□□□ 0.5
COL1A1-205ENST00000476387 TNFRSF25Q93038 417 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 FAM20AQ96MK3 541 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 C1QTNF1Q9BXJ1 281 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 KCNMB3Q9NPA1 279 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 NRBP2Q9NSY0 501 aa18.2■□□□□ 0.5
COL1A1-205ENST00000476387 TBX3O15119 743 aa18.19■□□□□ 0.5
COL1A1-205ENST00000476387 ZNF862O60290 1169 aa18.19■□□□□ 0.5
COL1A1-205ENST00000476387 MGEA5O60502 916 aa18.19■□□□□ 0.5
COL1A1-205ENST00000476387 GUCY1B3Q02153 619 aa18.19■□□□□ 0.5
COL1A1-205ENST00000476387 PTCRAQ6ISU1 281 aaPredicted RBP18.19■□□□□ 0.5
COL1A1-205ENST00000476387 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
COL1A1-205ENST00000476387 MAP7D2Q96T17 732 aa18.19■□□□□ 0.5
COL1A1-205ENST00000476387 OSMRQ99650 979 aa18.19■□□□□ 0.5
COL1A1-205ENST00000476387 ADAM2Q99965 735 aa18.19■□□□□ 0.5
COL1A1-205ENST00000476387 PLAGL2Q9UPG8 496 aa18.19■□□□□ 0.5
COL1A1-205ENST00000476387 PCDHB7Q9Y5E2 793 aa18.19■□□□□ 0.5
COL1A1-205ENST00000476387 GRXCR2A6NFK2 248 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 C9IYK1 514 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 BAG4O95429 457 aaKnown RBP18.18■□□□□ 0.5
COL1A1-205ENST00000476387 VTNP04004 478 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 CLCN3P51790 818 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 GNL2Q13823 731 aaKnown RBP18.18■□□□□ 0.5
COL1A1-205ENST00000476387 UGCGQ16739 394 aa18.18■□□□□ 0.5
COL1A1-205ENST00000476387 PAN2Q504Q3 1202 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms