RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 IER5LQ5T953 404 aa15.9■□□□□ 0.14
CCDC78-209ENST00000474647 JAKMIP3Q5VZ66 844 aa15.9■□□□□ 0.14
CCDC78-209ENST00000474647 SWSAP1Q6NVH7 229 aa15.9■□□□□ 0.14
CCDC78-209ENST00000474647 LLGL2Q6P1M3 1020 aa15.9■□□□□ 0.14
CCDC78-209ENST00000474647 FAM228AQ86W67 206 aa15.9■□□□□ 0.14
CCDC78-209ENST00000474647 ATP6V0A4Q9HBG4 840 aa15.9■□□□□ 0.14
CCDC78-209ENST00000474647 BARHL2Q9NY43 387 aa15.9■□□□□ 0.14
CCDC78-209ENST00000474647 FAM86B1E9PN63 330 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 hCG_1984214I3L0E3 225 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 IPO5O00410 1097 aaKnown RBP15.89■□□□□ 0.13
CCDC78-209ENST00000474647 FAM86B2P0C5J1 330 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 LAG3P18627 525 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 TECP42680 631 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 PTPN5P54829 565 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 CBX2Q14781 532 aaPredicted RBP15.89■□□□□ 0.13
CCDC78-209ENST00000474647 RNF20Q5VTR2 975 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 NIPA1Q7RTP0 329 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 BMP8AQ7Z5Y6 402 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 ZNF713Q8N859 430 aaPredicted RBP15.89■□□□□ 0.13
CCDC78-209ENST00000474647 CDCA3Q99618 268 aaPredicted RBP15.89■□□□□ 0.13
CCDC78-209ENST00000474647 ZNF577Q9BSK1 485 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 GLT8D2Q9H1C3 349 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 TMEM161AQ9NX61 479 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 BRPF3Q9ULD4 1205 aa15.89■□□□□ 0.13
CCDC78-209ENST00000474647 KLF18A0A0U1RQI7 1052 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 ZBTB42B2RXF5 422 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 C22orf31O95567 290 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 NEFLP07196 543 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 CLK2P49760 499 aaKnown RBP15.88■□□□□ 0.13
CCDC78-209ENST00000474647 CRYBB1P53674 252 aaPredicted RBP15.88■□□□□ 0.13
CCDC78-209ENST00000474647 SIGLEC14Q08ET2 396 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 ZBTB33Q86T24 672 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 ABI1Q8IZP0 508 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 FBXL6Q8N531 539 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 BBXQ8WY36 941 aaPredicted RBP15.88■□□□□ 0.13
CCDC78-209ENST00000474647 TCF25Q9BQ70 676 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 CWH43Q9H720 699 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 AKT3Q9Y243 479 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 SAMM50Q9Y512 469 aa15.88■□□□□ 0.13
CCDC78-209ENST00000474647 ARID2Q68CP9 1835 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 VPS13AQ96RL7 3174 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 IGLV3-22A0A075B6J6 115 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 FSCN2O14926 492 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 DHX15O43143 795 aaKnown RBP15.87■□□□□ 0.13
CCDC78-209ENST00000474647 ATF7P17544 494 aaPredicted RBP15.87■□□□□ 0.13
CCDC78-209ENST00000474647 ATP4AP20648 1035 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 CA8P35219 290 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 PBX3P40426 434 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 CLCN3P51790 818 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 FUT2Q10981 343 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 PDE12Q6L8Q7 609 aaKnown RBP15.87■□□□□ 0.13
CCDC78-209ENST00000474647 ANKRD54Q6NXT1 300 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 TEX2Q8IWB9 1127 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 RNF169Q8NCN4 708 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 SUSD6Q92537 303 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 MRPS27Q92552 414 aaKnown RBP15.87■□□□□ 0.13
CCDC78-209ENST00000474647 TSHZ2Q9NRE2 1034 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 PUF60Q9UHX1 559 aaKnown RBP15.87■□□□□ 0.13
CCDC78-209ENST00000474647 TDRD15B5MCY1 1934 aaKnown RBP15.87■□□□□ 0.13
CCDC78-209ENST00000474647 MYO15AQ9UKN7 3530 aa15.87■□□□□ 0.13
CCDC78-209ENST00000474647 HOXA2O43364 376 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 GPR32O75388 356 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 PSAPP07602 524 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 CDC27P30260 824 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 NLRP11P59045 1033 aaKnown RBP15.86■□□□□ 0.13
CCDC78-209ENST00000474647 FGD1P98174 961 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 SETQ01105 290 aaPredicted RBP15.86■□□□□ 0.13
CCDC78-209ENST00000474647 PKN1Q16512 942 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 LRRC43Q8N309 656 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 ZNF668Q96K58 619 aaPredicted RBP15.86■□□□□ 0.13
CCDC78-209ENST00000474647 ZNF558Q96NG5 402 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 SCLT1Q96NL6 688 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 MAP7D2Q96T17 732 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 PRRX2Q99811 253 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 TMEM117Q9H0C3 514 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 ELAC1Q9H777 363 aaKnown RBP15.86■□□□□ 0.13
CCDC78-209ENST00000474647 FAM86C1Q9NVL1 165 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 GABBR1Q9UBS5 961 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 CEP131Q9UPN4 1083 aa15.86■□□□□ 0.13
CCDC78-209ENST00000474647 HIDE1A8MVS5 230 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 ZSCAN20P17040 1043 aaPredicted RBP15.85■□□□□ 0.13
CCDC78-209ENST00000474647 PPM1AP35813 382 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 VCPP55072 806 aaKnown RBP15.85■□□□□ 0.13
CCDC78-209ENST00000474647 PLCB3Q01970 1234 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 DSC3Q14574 896 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 PTPN21Q16825 1174 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 ADCK5Q3MIX3 580 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 ZNF746Q6NUN9 644 aaPredicted RBP15.85■□□□□ 0.13
CCDC78-209ENST00000474647 KCNT2Q6UVM3 1135 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 FAM43BQ6ZT52 329 aaPredicted RBP15.85■□□□□ 0.13
CCDC78-209ENST00000474647 DHX32Q7L7V1 743 aaKnown RBP15.85■□□□□ 0.13
CCDC78-209ENST00000474647 TMC7Q7Z402 723 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 SMAP1Q8IYB5 467 aaPredicted RBP15.85■□□□□ 0.13
CCDC78-209ENST00000474647 LRRC71Q8N4P6 559 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 CASD1Q96PB1 797 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 TBC1D22BQ9NU19 505 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 LZTS1Q9Y250 596 aa15.85■□□□□ 0.13
CCDC78-209ENST00000474647 MAFBQ9Y5Q3 323 aaPredicted RBP15.85■□□□□ 0.13
CCDC78-209ENST00000474647 ADAMTS3O15072 1205 aa15.84■□□□□ 0.13
CCDC78-209ENST00000474647 CYP3A4P08684 503 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms