RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 RIN2Q8WYP3 895 aaPredicted RBP9.58□□□□□ -0.88
COL6A3-210ENST00000473258 JMJD4Q9H9V9 463 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 KRT84Q9NSB2 600 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 DNAJC11Q9NVH1 559 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 GPC6Q9Y625 555 aaPredicted RBP9.58□□□□□ -0.88
COL6A3-210ENST00000473258 CCDC182A6NF36 153 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 TRIM64A6NGJ6 449 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 TRIM64BA6NI03 449 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 SPDYE5A6NIY4 337 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 SAC3D1A6NKF1 404 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 PSTPIP1O43586 416 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 HSPA4LO95757 839 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 KRT19P08727 400 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 GSPT1P15170 499 aaKnown RBP9.58□□□□□ -0.88
COL6A3-210ENST00000473258 RPS6KB1P23443 525 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 SMARCA1P28370 1054 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 LGALS3BPQ08380 585 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 ZNF786Q8N393 782 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 MINDY2Q8NBR6 621 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 PDCD10Q9BUL8 212 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 EDEM3Q9BZQ6 932 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 EXOSC4Q9NPD3 245 aaKnown RBP9.58□□□□□ -0.88
COL6A3-210ENST00000473258 MTMR6Q9Y217 621 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 COPEO14579 308 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 INPP5AQ14642 412 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 CNDP1Q96KN2 507 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 DCUN1D5Q9BTE7 237 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 EPS8L2Q9H6S3 715 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 LIN7AO14910 233 aaPredicted RBP9.58□□□□□ -0.88
COL6A3-210ENST00000473258 MOCS3O95396 460 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 GNA14O95837 355 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 CMA1P23946 247 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 PSEN1P49768 467 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 IZUMO2Q6UXV1 221 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 RBM12BQ8IXT5 1001 aaKnown RBP9.58□□□□□ -0.88
COL6A3-210ENST00000473258 OR8H2Q8N162 312 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 MCUQ8NE86 351 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 VPS50Q96JG6 964 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 PRMT1Q99873 361 aaKnown RBP9.58□□□□□ -0.88
COL6A3-210ENST00000473258 OSBPL5Q9H0X9 879 aaPredicted RBP9.58□□□□□ -0.88
COL6A3-210ENST00000473258 UBN1Q9NPG3 1134 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 SERTAD1Q9UHV2 236 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 GGA2Q9UJY4 613 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 MAP3K5Q99683 1374 aa9.58□□□□□ -0.88
COL6A3-210ENST00000473258 F6X3S4 739 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 ADCY6O43306 1168 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 TBC1D4O60343 1298 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 TOMM70O94826 608 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 KLHL18O94889 574 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 FTCDO95954 541 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 CLCN2P51788 898 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 ITGA7Q13683 1181 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 SGO2Q562F6 1265 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 LRIG3Q6UXM1 1119 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 BRIP1Q9BX63 1249 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 ARHGEF3Q9NR81 526 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 LRWD1Q9UFC0 647 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 UBE4BO95155 1302 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 PDE9AO76083 593 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 AGTP01019 485 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 DDX5P17844 614 aaKnown RBP9.57□□□□□ -0.88
COL6A3-210ENST00000473258 RPS6P62753 249 aaKnown RBP9.57□□□□□ -0.88
COL6A3-210ENST00000473258 ZNF174Q15697 407 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 USF2Q15853 346 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-210ENST00000473258 IYDQ6PHW0 289 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 RAPH1Q70E73 1250 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 SNX32Q86XE0 403 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 SMYD2Q9NRG4 433 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 BAIAP2Q9UQB8 552 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 RBMX2Q9Y388 322 aaKnown RBP9.57□□□□□ -0.88
COL6A3-210ENST00000473258 KDRP35968 1356 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 SMIM31A0A1B0GVY4 71 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 RAD51BO15315 384 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 ENO1P06733 434 aaKnown RBP9.57□□□□□ -0.88
COL6A3-210ENST00000473258 CHN1P15882 459 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 KPNA2P52292 529 aaKnown RBP9.57□□□□□ -0.88
COL6A3-210ENST00000473258 ATP13A5Q4VNC0 1218 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 MPRIPQ6WCQ1 1025 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 LRRC20Q8TCA0 184 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 SCN3BQ9NY72 215 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 CIDEBQ9UHD4 219 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 B2RBV5 119 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 BTN3A3O00478 584 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 MED26O95402 600 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 GHRP10912 638 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 ATF7P17544 494 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-210ENST00000473258 ADAM17P78536 824 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 PRPSAP1Q14558 356 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 ITIH4Q14624 930 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 ZC2HC1CQ53FD0 456 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-210ENST00000473258 SULT6B1Q6IMI4 303 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 PI16Q6UXB8 463 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 PRR23CQ6ZRP0 262 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 TRMT1LQ7Z2T5 733 aaKnown RBP9.57□□□□□ -0.88
COL6A3-210ENST00000473258 APOL4Q9BPW4 351 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 REXO4Q9GZR2 422 aaKnown RBP9.57□□□□□ -0.88
COL6A3-210ENST00000473258 VAT1LQ9HCJ6 419 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 RRN3Q9NYV6 651 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 SUN2Q9UH99 717 aa9.57□□□□□ -0.88
COL6A3-210ENST00000473258 UBN2Q6ZU65 1347 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms