RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 LRCH2Q5VUJ6 765 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 CIAPIN1Q6FI81 312 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 NIPA1Q7RTP0 329 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 CCDC155Q8N6L0 562 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 TRIM58Q8NG06 486 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 GOLGA5Q8TBA6 731 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 SLC5A5Q92911 643 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 SECISBP2LQ93073 1101 aaKnown RBP8.4□□□□□ -1.06
CCDC171-205ENST00000472806 HPS3Q969F9 1004 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 LENG9Q96B70 501 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 ALS2CR12Q96Q35 445 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 CDK15Q96Q40 435 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 NACC1Q96RE7 527 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 EIF2AK1Q9BQI3 630 aaKnown RBP8.4□□□□□ -1.06
CCDC171-205ENST00000472806 TEKT3Q9BXF9 490 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 ZHX3Q9H4I2 956 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 ARFGAP3Q9NP61 516 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 ZNF277Q9NRM2 450 aaPredicted RBP8.4□□□□□ -1.06
CCDC171-205ENST00000472806 TYW1Q9NV66 732 aaKnown RBP8.4□□□□□ -1.06
CCDC171-205ENST00000472806 PIM2Q9P1W9 311 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 TCEAL9Q9UHQ7 104 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 MYO6Q9UM54 1294 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 GUCA1BQ9UMX6 200 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 CTDP1Q9Y5B0 961 aaPredicted RBP8.4□□□□□ -1.06
CCDC171-205ENST00000472806 PCDHA2Q9Y5H9 948 aa8.4□□□□□ -1.06
CCDC171-205ENST00000472806 CNTNAP1P78357 1384 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 CCDC151A5D8V7 595 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 FAM86B1E9PN63 330 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 RNF225M0QZC1 329 aaPredicted RBP8.39□□□□□ -1.07
CCDC171-205ENST00000472806 AKR1B10O60218 316 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 FAM13AO94988 1023 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 LCA5LO95447 670 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 SERPING1P05155 500 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 ICAM1P05362 532 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 FAM86B2P0C5J1 330 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 SPATA31C1P0DKV0 1188 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 EPB41P11171 864 aaKnown RBP8.39□□□□□ -1.07
CCDC171-205ENST00000472806 BCRP11274 1271 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 DPEP1P16444 411 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 POLD1P28340 1107 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 STAT3P40763 770 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 GABPB1Q06547 395 aaPredicted RBP8.39□□□□□ -1.07
CCDC171-205ENST00000472806 PABPC4Q13310 644 aaKnown RBP eCLIP8.39□□□□□ -1.07
CCDC171-205ENST00000472806 ALCAMQ13740 583 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 GIT2Q14161 759 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 LRRC41Q15345 812 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 EPHA7Q15375 998 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 NFIL3Q16649 462 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 KNOP1Q1ED39 458 aaKnown RBP8.39□□□□□ -1.07
CCDC171-205ENST00000472806 CEP55Q53EZ4 464 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 C10orf76Q5T2E6 689 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 SFMBT2Q5VUG0 894 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 PDXDC1Q6P996 788 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 CCDC174Q6PII3 467 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 WDR59Q6PJI9 974 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 TRIM59Q8IWR1 403 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 SPICE1Q8N0Z3 855 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 FAM174AQ8TBP5 190 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 SCFD1Q8WVM8 642 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 RIT2Q99578 217 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 KCTD10Q9H3F6 313 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 OLFML3Q9NRN5 406 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 AGPAT5Q9NUQ2 364 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 ARMCX3Q9UH62 379 aaPredicted RBP8.39□□□□□ -1.07
CCDC171-205ENST00000472806 VAV3Q9UKW4 847 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 ODF2LQ9ULJ1 636 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 SAR1BQ9Y6B6 198 aa8.39□□□□□ -1.07
CCDC171-205ENST00000472806 BZW2Q9Y6E2 419 aaKnown RBP8.39□□□□□ -1.07
CCDC171-205ENST00000472806 IGLV3-22A0A075B6J6 115 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 PSMD10O75832 226 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 NR2F2P24468 414 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 HOXA13P31271 388 aaPredicted RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 GJA5P36382 358 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 ECE1P42892 770 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 KIF11P52732 1056 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 USP14P54578 494 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 SNAP25P60880 206 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 HERVK_113P62684 666 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 CBX1P83916 185 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 RRP1BQ14684 758 aaKnown RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 SHROOM1Q2M3G4 852 aaPredicted RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 DALRD3Q5D0E6 543 aaKnown RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 ARSHQ5FYA8 562 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 PAPD7Q5XG87 772 aaKnown RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 DCAF15Q66K64 600 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 RRAGAQ7L523 313 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 EPM2AIP1Q7L775 607 aaPredicted RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 OTOP1Q7RTM1 612 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 LDHDQ86WU2 507 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 SFR1Q86XK3 245 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 NPAS3Q8IXF0 933 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 NELFCDQ8IXH7 590 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 RNF10Q8N5U6 811 aaKnown RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 PRPF38AQ8NAV1 312 aaKnown RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 MSANTD4Q8NCY6 345 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 SLC17A8Q8NDX2 589 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 ACER1Q8TDN7 264 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 HNRNPLLQ8WVV9 542 aaKnown RBP8.38□□□□□ -1.07
CCDC171-205ENST00000472806 RUBCNQ92622 972 aa8.38□□□□□ -1.07
CCDC171-205ENST00000472806 ZBED3Q96IU2 234 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms