RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 CXXC5Q7LFL8 322 aaKnown RBP7.84□□□□□ -1.15
CLK1-209ENST00000472679 KANSL1Q7Z3B3 1105 aa7.84□□□□□ -1.15
CLK1-209ENST00000472679 WDR48Q8TAF3 677 aa7.84□□□□□ -1.15
CLK1-209ENST00000472679 KRTAP4-12Q9BQ66 201 aa7.84□□□□□ -1.15
CLK1-209ENST00000472679 FTSJ1Q9UET6 329 aa7.84□□□□□ -1.15
CLK1-209ENST00000472679 MAGEL2Q9UJ55 1249 aa7.84□□□□□ -1.15
CLK1-209ENST00000472679 CDC42EP3Q9UKI2 254 aa7.84□□□□□ -1.15
CLK1-209ENST00000472679 CYP1A1P04798 512 aaPredicted RBP7.83□□□□□ -1.16
CLK1-209ENST00000472679 NCLP19338 710 aaKnown RBP7.83□□□□□ -1.16
CLK1-209ENST00000472679 IBSPP21815 317 aaPredicted RBP7.83□□□□□ -1.16
CLK1-209ENST00000472679 ADCY2Q08462 1091 aa7.83□□□□□ -1.16
CLK1-209ENST00000472679 RGL3Q3MIN7 710 aa7.83□□□□□ -1.16
CLK1-209ENST00000472679 TIGD7Q6NT04 549 aaPredicted RBP7.83□□□□□ -1.16
CLK1-209ENST00000472679 CXorf67Q86X51 503 aaPredicted RBP7.83□□□□□ -1.16
CLK1-209ENST00000472679 BCL6BQ8N143 479 aaPredicted RBP7.83□□□□□ -1.16
CLK1-209ENST00000472679 KRTAP9-2Q9BYQ4 174 aa7.83□□□□□ -1.16
CLK1-209ENST00000472679 ANO3Q9BYT9 981 aa7.83□□□□□ -1.16
CLK1-209ENST00000472679 TMEM168Q9H0V1 697 aa7.83□□□□□ -1.16
CLK1-209ENST00000472679 USP36Q9P275 1121 aaKnown RBP7.83□□□□□ -1.16
CLK1-209ENST00000472679 hCG_2014768A0A024R1R8 64 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 PRSS38A1L453 326 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 CLEC2LP0C7M8 214 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 POLD1P28340 1107 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 GUCY2FP51841 1108 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 ANTXR2P58335 489 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 TOP3AQ13472 1001 aaPredicted RBP7.82□□□□□ -1.16
CLK1-209ENST00000472679 FAM26FQ5R3K3 315 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 KIAA1841Q6NSI8 718 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 Q6ZUG5 572 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 ESPNLQ6ZVH7 1005 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 MARCH10Q8NA82 808 aaPredicted RBP7.82□□□□□ -1.16
CLK1-209ENST00000472679 MBD6Q96DN6 1003 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 PPP2R3BQ9Y5P8 575 aa7.82□□□□□ -1.16
CLK1-209ENST00000472679 NOBOXO60393 691 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 KATNA1O75449 491 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 BMP7P18075 431 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 KCNC1P48547 511 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 KCNQ1P51787 676 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 MANFP55145 182 aaKnown RBP7.81□□□□□ -1.16
CLK1-209ENST00000472679 JAG1P78504 1218 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 TMEM200BQ69YZ2 307 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 GRAMD4Q6IC98 578 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 OTOP2Q7RTS6 562 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 CNTD1Q8N815 330 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 PRDM12Q9H4Q4 367 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 LUC7LQ9NQ29 371 aaKnown RBP7.81□□□□□ -1.16
CLK1-209ENST00000472679 PTPN22Q9Y2R2 807 aa7.81□□□□□ -1.16
CLK1-209ENST00000472679 A0A0G2JNJ9 132 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 MAFO75444 373 aaPredicted RBP7.8□□□□□ -1.16
CLK1-209ENST00000472679 SCAND1P57086 179 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 ERVK-21P61565 698 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 NFATC3Q12968 1075 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 MTMR1Q13613 665 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 NT5DC1Q5TFE4 455 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 GPR155Q7Z3F1 870 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 NECAB2Q7Z6G3 386 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 AHCYL2Q96HN2 611 aaKnown RBP7.8□□□□□ -1.16
CLK1-209ENST00000472679 AJUBAQ96IF1 538 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 KATNBL1Q9H079 304 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 CCDC8Q9H0W5 538 aaPredicted RBP7.8□□□□□ -1.16
CLK1-209ENST00000472679 MTG2Q9H4K7 406 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 C14orf119Q9NWQ9 140 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 Q9UFV3 132 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 TMPRSS11EQ9UL52 423 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 ZDHHC9Q9Y397 364 aa7.8□□□□□ -1.16
CLK1-209ENST00000472679 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.79□□□□□ -1.16
CLK1-209ENST00000472679 PCDH8O95206 1070 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 ZNF888P0CJ79 500 aaPredicted RBP7.79□□□□□ -1.16
CLK1-209ENST00000472679 CSF2RBP32927 897 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 STAT5BP51692 787 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 ANAPC15P60006 121 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 IGBP1P78318 339 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 EIF4HQ15056 248 aaKnown RBP7.79□□□□□ -1.16
CLK1-209ENST00000472679 CT83Q5H943 113 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 LARP4Q71RC2 724 aaKnown RBP eCLIP7.79□□□□□ -1.16
CLK1-209ENST00000472679 SIAH1Q8IUQ4 282 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 KLHL36Q8N4N3 616 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 OR5AN1Q8NGI8 311 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 FEZF2Q8TBJ5 459 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 FERMT2Q96AC1 680 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 LCORQ96JN0 433 aaPredicted RBP7.79□□□□□ -1.16
CLK1-209ENST00000472679 KCNC2Q96PR1 638 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 PITHD1Q9GZP4 211 aaPredicted RBP7.79□□□□□ -1.16
CLK1-209ENST00000472679 PUS7LQ9H0K6 701 aaKnown RBP7.79□□□□□ -1.16
CLK1-209ENST00000472679 ADAM29Q9UKF5 820 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 DENND2AQ9ULE3 1009 aa7.79□□□□□ -1.16
CLK1-209ENST00000472679 MYPNQ86TC9 1320 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 WASHC2CQ9Y4E1 1318 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 MROH6A6NGR9 719 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 C9orf118A6NHY6 69 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 GOLGA8AA7E2F4 631 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 GOLGA8BA8MQT2 603 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 PFKMP08237 780 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 ETV4P43268 484 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 BCAR1P56945 870 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 CCDC62Q6P9F0 684 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 LYSMD2Q8IV50 215 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 TGFBRAP1Q8WUH2 860 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 LMBR1Q8WVP7 490 aa7.78□□□□□ -1.16
CLK1-209ENST00000472679 RPGRQ92834 1020 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms