RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SLC5A3P53794 718 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 CHAF1AQ13111 956 aaPredicted RBP8.31□□□□□ -1.08
SMC5-202ENST00000471372 DUSP4Q13115 394 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 DOC2BQ14184 412 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 TRIM25Q14258 630 aaKnown RBP8.31□□□□□ -1.08
SMC5-202ENST00000471372 CHRNA2Q15822 529 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 MBNL2Q5VZF2 373 aaKnown RBP8.31□□□□□ -1.08
SMC5-202ENST00000471372 ANO1Q5XXA6 986 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 C1orf228Q6PIY5 440 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 CILP2Q8IUL8 1156 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 LYSMD2Q8IV50 215 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 DENND1CQ8IV53 801 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 TSPEARQ8WU66 669 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 ASB11Q8WXH4 323 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 TUBGCP5Q96RT8 1024 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 PLCD4Q9BRC7 762 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.31□□□□□ -1.08
SMC5-202ENST00000471372 MAF1Q9H063 256 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 TMEM60Q9H2L4 133 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 ADAMTS10Q9H324 1103 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 CARS2Q9HA77 564 aaKnown RBP8.31□□□□□ -1.08
SMC5-202ENST00000471372 PDLIM7Q9NR12 457 aa8.31□□□□□ -1.08
SMC5-202ENST00000471372 FAM227AF5H4B4 570 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 UBXN7O94888 489 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 PRPF6O94906 941 aaKnown RBP8.3□□□□□ -1.08
SMC5-202ENST00000471372 ALDH2P05091 517 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 CD96P40200 585 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 SLC6A11P48066 632 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 LGALS4P56470 323 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 CCT2P78371 535 aaKnown RBP8.3□□□□□ -1.08
SMC5-202ENST00000471372 CDK17Q00537 523 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 STK3Q13188 491 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 RAPGEF1Q13905 1077 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 MYBPC3Q14896 1274 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 CPSF6Q16630 551 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMC5-202ENST00000471372 KIAA0753Q2KHM9 967 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 PGS1Q32NB8 556 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 RALGPS1Q5JS13 557 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 UNQ6494/PRO21346Q6UXR6 183 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 NUP43Q8NFH3 380 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 MYRIPQ8NFW9 859 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 APOL5Q9BWW9 433 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 B3GNT5Q9BYG0 378 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 BHMT2Q9H2M3 363 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 IFT122Q9HBG6 1241 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 LIMCH1Q9UPQ0 1083 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 PCDHB4Q9Y5E5 795 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 TAF6LQ9Y6J9 622 aa8.3□□□□□ -1.08
SMC5-202ENST00000471372 KLRG2A4D1S0 409 aaPredicted RBP8.29□□□□□ -1.08
SMC5-202ENST00000471372 SGSM2O43147 1006 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 B3GALT2O43825 422 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 IGLV1-40P01703 118 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 GATA4P43694 442 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 FAM193AP78312 1265 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 SEMA5AQ13591 1074 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 TMEM95Q3KNT9 176 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 TTC38Q5R3I4 469 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 TIGD7Q6NT04 549 aaPredicted RBP8.29□□□□□ -1.08
SMC5-202ENST00000471372 KIAA0319LQ8IZA0 1049 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 HIPK4Q8NE63 616 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 PHOSPHO1Q8TCT1 267 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 RIN2Q8WYP3 895 aaPredicted RBP8.29□□□□□ -1.08
SMC5-202ENST00000471372 LRFN3Q9BTN0 628 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 SEMA6BQ9H3T3 888 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 RSAD1Q9HA92 442 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 PNMA2Q9UL42 364 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 POLHQ9Y253 713 aa8.29□□□□□ -1.08
SMC5-202ENST00000471372 ABHD14A-ACY1A0A1B0GW23 586 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 TCRBV5S2A0A599 114 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 PRAMEF22A3QJZ6 481 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 GOLGA6L22H0YM25 854 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 WDHD1O75717 1129 aaPredicted RBP8.28□□□□□ -1.08
SMC5-202ENST00000471372 EFEMP2O95967 443 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 PRLP01236 227 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 SETSIPP0DME0 302 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 GLI4P10075 376 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 PRKCAP17252 672 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 EDNRBP24530 442 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 TM4SF4P48230 202 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 SLC16A1P53985 500 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 IKZF1Q13422 519 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 PRAMEF18Q5VWM3 479 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 PRAMEF9Q5VWM5 478 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 NPNTQ6UXI9 565 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 ARRDC4Q8NCT1 418 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 SEC14L1Q92503 715 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 TBCBQ99426 244 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 WNT8AQ9H1J5 351 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 RXFP1Q9HBX9 757 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 SLAMF8Q9P0V8 285 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 ACSL6Q9UKU0 697 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 PALD1Q9ULE6 856 aa8.28□□□□□ -1.08
SMC5-202ENST00000471372 CCDC154A6NI56 674 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 NOTOA8MTQ0 251 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 TBX3O15119 743 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 HTRA2O43464 458 aaPredicted RBP8.27□□□□□ -1.09
SMC5-202ENST00000471372 NBNO60934 754 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 DTNBO60941 627 aa8.27□□□□□ -1.09
SMC5-202ENST00000471372 ZKSCAN1P17029 563 aaPredicted RBP8.27□□□□□ -1.09
SMC5-202ENST00000471372 HERVK_113P62684 666 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms