RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 AFG1LQ8WV93 481 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 MTERF3Q96E29 417 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 CNBD2Q96M20 576 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 ZNF556Q9HAH1 456 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 DYRK4Q9NR20 520 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 EHD2Q9NZN4 543 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 STK17AQ9UEE5 414 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 KIAA1107Q9UPP5 1409 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 PGRMC1O00264 195 aaKnown RBP7.35□□□□□ -1.23
BRCA1-210ENST00000471181 CLIC2O15247 247 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 MYL3P08590 195 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 OR52Z1P0C646 297 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 IL2RBP14784 551 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 OSBPP22059 807 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 PSMA2P25787 234 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 DR1Q01658 176 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 RUNX1T1Q06455 604 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 SYTL3Q4VX76 610 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 SLC35F6Q8N357 371 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 COG1Q8WTW3 980 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 CYGBQ8WWM9 190 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 THAP11Q96EK4 314 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 OLFM3Q96PB7 478 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 CCDC87Q9NVE4 849 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 BCORL1Q5H9F3 1711 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 ITGAXP20702 1163 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 IL10P22301 178 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 CUL3Q13618 768 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 TNNI3KQ59H18 835 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 FAM47EQ6ZV65 393 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 ARMCX2Q7L311 632 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 DDX53Q86TM3 631 aaKnown RBP7.35□□□□□ -1.23
BRCA1-210ENST00000471181 ACCSQ96QU6 501 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 BCL2L14Q9BZR8 327 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 HAUS4Q9H6D7 363 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 MAN1C1Q9NR34 630 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 ZC3H7BQ9UGR2 993 aaKnown RBP7.35□□□□□ -1.23
BRCA1-210ENST00000471181 FPGT-TNNI3KV9GXZ4 949 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 TIAM1Q13009 1591 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 DAPK1P53355 1430 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 TBC1D4O60343 1298 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 DLGAP3O95886 979 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 PSMC2P35998 433 aaKnown RBP7.35□□□□□ -1.23
BRCA1-210ENST00000471181 YAF2Q8IY57 180 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 TBC1D19Q8N5T2 526 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 FAM133AQ8N9E0 248 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 SPATA5Q8NB90 893 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 OR6B3Q8NGW1 331 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 EEF2KMTQ96G04 330 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 USP28Q96RU2 1077 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 PKD2L2Q9NZM6 624 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 KIAA1468Q9P260 1216 aa7.35□□□□□ -1.23
BRCA1-210ENST00000471181 FARP1Q9Y4F1 1045 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-210ENST00000471181 NFIBO00712 420 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 FBLN1P23142 703 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 NCALDP61601 193 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 SLC7A5Q01650 507 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 MAPRE1Q15691 268 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 C11orf88Q6PI97 169 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 HEATR4Q86WZ0 1026 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 CCDC103Q8IW40 242 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 EXOC8Q8IYI6 725 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 COQ7Q99807 217 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 MRPL47Q9HD33 250 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 KIAA1024Q9UPX6 916 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 FAM32AQ9Y421 112 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 SNX14Q9Y5W7 946 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 IBTKQ9P2D0 1353 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 ABCA9Q8IUA7 1624 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 ZNF532Q9HCE3 1301 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 ARHGEF37A1IGU5 675 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 JAK2O60674 1132 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 TMED10P49755 219 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 SCNN1DP51172 638 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 PMS2P54278 862 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 PPARAQ07869 468 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 TRIM25Q14258 630 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 C11orf96Q7Z7L8 435 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 SCN4BQ8IWT1 228 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 THEM5Q8N1Q8 247 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 LRRC59Q96AG4 307 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 LSG1Q9H089 658 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 RRAGDQ9NQL2 400 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 DCDC2Q9UHG0 476 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 NDUFB9Q9Y6M9 179 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 DDX5P17844 614 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 GPR1P46091 355 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 DEFA1P59665 94 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 DEFA3P59666 94 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 MDH1BQ5I0G3 518 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 SPDYAQ5MJ70 313 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 MFSD4BQ5TF39 518 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 DPY19L2Q6NUT2 758 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 KRT26Q7Z3Y9 468 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 MFN1Q8IWA4 741 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 RIN3Q8TB24 985 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 DIS3LQ8TF46 1054 aaKnown RBP7.34□□□□□ -1.23
BRCA1-210ENST00000471181 ZNF577Q9BSK1 485 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 DTNAQ9Y4J8 743 aa7.34□□□□□ -1.23
BRCA1-210ENST00000471181 LINC00854A0A1B0GVQ3 168 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms