RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ANO3Q9BYT9 981 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 ERVK-5Q9HDB9 667 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 C1orf112Q9NSG2 853 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 LRFN2Q9ULH4 789 aa10.28□□□□□ -0.76
SF3A1-206ENST00000471037 USP15Q9Y4E8 981 aaPredicted RBP10.28□□□□□ -0.76
SF3A1-206ENST00000471037 C5orf42Q9H799 3197 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 C9IYK1 514 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 CPLX1O14810 134 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 HBP1O60381 514 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 MGEA5O60502 916 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 RPS6KA5O75582 802 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 CCNE2O96020 404 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 ATF7P17544 494 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-206ENST00000471037 CLK2P49760 499 aaKnown RBP10.27□□□□□ -0.77
SF3A1-206ENST00000471037 NAPAP54920 295 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 CCT2P78371 535 aaKnown RBP10.27□□□□□ -0.77
SF3A1-206ENST00000471037 FUT2Q10981 343 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 NFX1Q12986 1120 aaKnown RBP10.27□□□□□ -0.77
SF3A1-206ENST00000471037 PKN1Q16512 942 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 TMEM266Q2M3C6 531 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 ODR4Q5SWX8 454 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 FAM160B1Q5W0V3 765 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 ABHD15Q6UXT9 468 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 TRIM67Q6ZTA4 783 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 SLC24A5Q71RS6 500 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 NIPA1Q7RTP0 329 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 CCDC60Q8IWA6 550 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-206ENST00000471037 KIAA0319LQ8IZA0 1049 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 TMEM40Q8WWA1 233 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 SUSD6Q92537 303 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 PGBD1Q96JS3 809 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 CDCA3Q99618 268 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-206ENST00000471037 PHF7Q9BWX1 381 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-206ENST00000471037 GLT8D2Q9H1C3 349 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 TLR9Q9NR96 1032 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 AAASQ9NRG9 546 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 RGS18Q9NS28 235 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 BARX2Q9UMQ3 279 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-206ENST00000471037 NOC2LQ9Y3T9 749 aaKnown RBP10.27□□□□□ -0.77
SF3A1-206ENST00000471037 PCDHB7Q9Y5E2 793 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 PCDHB12Q9Y5F1 795 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 PCDHGC5Q9Y5F6 944 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 PLXNA4Q9HCM2 1894 aa10.27□□□□□ -0.77
SF3A1-206ENST00000471037 DENND3A2RUS2 1198 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 TMEM221A6NGB7 291 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 ZBTB42B2RXF5 422 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 M0R296 226 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 GPR182O15218 404 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 DHX15O43143 795 aaKnown RBP10.26□□□□□ -0.77
SF3A1-206ENST00000471037 FGF18O76093 207 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 KLRC1P26715 233 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 ADCY7P51828 1080 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 HMGN5P82970 282 aaKnown RBP10.26□□□□□ -0.77
SF3A1-206ENST00000471037 ZXDAP98168 799 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 ZNF484Q5JVG2 852 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 PDE12Q6L8Q7 609 aaKnown RBP10.26□□□□□ -0.77
SF3A1-206ENST00000471037 RBM23Q86U06 439 aaKnown RBP10.26□□□□□ -0.77
SF3A1-206ENST00000471037 VN1R2Q8NFZ6 395 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 RASGRP4Q8TDF6 673 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 CRYGNQ8WXF5 182 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 PRRX2Q99811 253 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 ADAM2Q99965 735 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 ELAC1Q9H777 363 aaKnown RBP10.26□□□□□ -0.77
SF3A1-206ENST00000471037 TLE6Q9H808 572 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 CDHR5Q9HBB8 845 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 NCOA5Q9HCD5 579 aaKnown RBP10.26□□□□□ -0.77
SF3A1-206ENST00000471037 FAM217BQ9NTX9 383 aaPredicted RBP10.26□□□□□ -0.77
SF3A1-206ENST00000471037 TMEM161AQ9NX61 479 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 BARHL2Q9NY43 387 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 ST3GAL5Q9UNP4 418 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 SMC3Q9UQE7 1217 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 LZTS1Q9Y250 596 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 KIF3AQ9Y496 699 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 LOXHD1Q8IVV2 1947 aa10.26□□□□□ -0.77
SF3A1-206ENST00000471037 FNDC1Q4ZHG4 1894 aaPredicted RBP10.25□□□□□ -0.77
SF3A1-206ENST00000471037 IGLV3-22A0A075B6J6 115 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 SMCO2A6NFE2 343 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 TBKBP1A7MCY6 615 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 FAM86B1E9PN63 330 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 BACH1O14867 736 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 FSCN2O14926 492 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 PPFIA3O75145 1194 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 C22orf31O95567 290 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 FAM86B2P0C5J1 330 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 IFNAR1P17181 557 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 CDC27P30260 824 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 ADD1P35611 737 aaKnown RBP10.25□□□□□ -0.77
SF3A1-206ENST00000471037 CRYBB1P53674 252 aaPredicted RBP10.25□□□□□ -0.77
SF3A1-206ENST00000471037 PTPN5P54829 565 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 FAM189BP81408 668 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 KCNC3Q14003 757 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 NTRK3Q16288 839 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 DUSP6Q16828 381 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 FAM102BQ5T8I3 360 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 TMEM184AQ6ZMB5 413 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 FAM228AQ86W67 206 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 COLGALT1Q8NBJ5 622 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 NSUN7Q8NE18 718 aaKnown RBP10.25□□□□□ -0.77
SF3A1-206ENST00000471037 PRSS33Q8NF86 280 aa10.25□□□□□ -0.77
SF3A1-206ENST00000471037 MICAL1Q8TDZ2 1067 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms