RNA–Protein interactions for RNA: ENST00000470668.5

HDAC7-219, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 4,266 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-219ENST00000470668 BRINP3Q76B58 766 aa15.27■□□□□ 0.04
HDAC7-219ENST00000470668 USP38Q8NB14 1042 aa15.27■□□□□ 0.04
HDAC7-219ENST00000470668 NBPF3Q9H094 633 aa15.27■□□□□ 0.04
HDAC7-219ENST00000470668 FAM153AQ9UHL3 310 aa15.27■□□□□ 0.04
HDAC7-219ENST00000470668 BCAP29Q9UHQ4 241 aa15.27■□□□□ 0.04
HDAC7-219ENST00000470668 DIP2CQ9Y2E4 1556 aa15.27■□□□□ 0.03
HDAC7-219ENST00000470668 TMEM120BA0PK00 339 aa15.27■□□□□ 0.03
HDAC7-219ENST00000470668 GOLGA8SH3BPF8 625 aa15.27■□□□□ 0.03
HDAC7-219ENST00000470668 GOLGA8MH3BSY2 632 aa15.27■□□□□ 0.03
HDAC7-219ENST00000470668 TOM1L1O75674 476 aa15.27■□□□□ 0.03
HDAC7-219ENST00000470668 CCDC14Q49A88 953 aa15.27■□□□□ 0.03
HDAC7-219ENST00000470668 ILDR1Q86SU0 546 aaPredicted RBP15.27■□□□□ 0.03
HDAC7-219ENST00000470668 TMEM60Q9H2L4 133 aa15.27■□□□□ 0.03
HDAC7-219ENST00000470668 GINM1Q9NU53 330 aa15.27■□□□□ 0.03
HDAC7-219ENST00000470668 PCDHA1Q9Y5I3 950 aa15.27■□□□□ 0.03
HDAC7-219ENST00000470668 NVLO15381 856 aaKnown RBP15.26■□□□□ 0.03
HDAC7-219ENST00000470668 ABL1P00519 1130 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 BASP1P80723 227 aaKnown RBP15.26■□□□□ 0.03
HDAC7-219ENST00000470668 EAPPQ56P03 285 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-219ENST00000470668 KIAA1755Q5JYT7 1200 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 NLRP7Q8WX94 980 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 GLG1Q92896 1179 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 ATG3Q9NT62 314 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 E9PMD0 336 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 DNAJC8O75937 253 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-219ENST00000470668 CYP2D6P10635 497 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 KITP10721 976 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 SAT1P21673 171 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 PHEXP78562 749 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 RBM26Q5T8P6 1007 aaKnown RBP15.26■□□□□ 0.03
HDAC7-219ENST00000470668 AGBL2Q5U5Z8 902 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 KRT80Q6KB66 452 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 RUBCNQ92622 972 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 C9orf72Q96LT7 481 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 GLT8D2Q9H1C3 349 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 ISCUQ9H1K1 167 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 PAPOLBQ9NRJ5 636 aaKnown RBP15.26■□□□□ 0.03
HDAC7-219ENST00000470668 WDR19Q8NEZ3 1342 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 SYNGAP1Q96PV0 1343 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 UBOX5O94941 541 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 AGTP01019 485 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 NCF2P19878 526 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-219ENST00000470668 MRPS35P82673 323 aaKnown RBP15.26■□□□□ 0.03
HDAC7-219ENST00000470668 NME8Q8N427 588 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 SLC17A8Q8NDX2 589 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 TUBB6Q9BUF5 446 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 INTS13Q9NVM9 706 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 GSG1L2A8MUP6 293 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 ACTN1P12814 892 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 TBX2Q13207 712 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-219ENST00000470668 PFKFB3Q16875 520 aaPredicted RBP15.26■□□□□ 0.03
HDAC7-219ENST00000470668 SUSD4Q5VX71 490 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 RGS9BPQ6ZS82 235 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 TRIM59Q8IWR1 403 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 GUF1Q8N442 669 aaKnown RBP15.26■□□□□ 0.03
HDAC7-219ENST00000470668 PYROXD1Q8WU10 500 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 ANKS1AQ92625 1134 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 BHMT2Q9H2M3 363 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 RHBDL2Q9NX52 303 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 NDE1Q9NXR1 346 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 TACC3Q9Y6A5 838 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 RIMBP3CA6NJZ7 1639 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 RIMBP3BA6NNM3 1639 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 RIMBP3Q9UFD9 1639 aa15.26■□□□□ 0.03
HDAC7-219ENST00000470668 PDE2AO00408 941 aaPredicted RBP15.25■□□□□ 0.03
HDAC7-219ENST00000470668 ATP6V1G2O95670 118 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 KCNJ1P48048 391 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 ARHGAP4P98171 946 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 SWT1Q5T5J6 900 aaKnown RBP15.25■□□□□ 0.03
HDAC7-219ENST00000470668 ATP6V0A4Q9HBG4 840 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 C1orf112Q9NSG2 853 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 EXOC7Q9UPT5 735 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 NQO1P15559 274 aaKnown RBP15.25■□□□□ 0.03
HDAC7-219ENST00000470668 AARSP49588 968 aaKnown RBP eCLIP15.25■□□□□ 0.038e-6■■□□□ 13.9
HDAC7-219ENST00000470668 TMPRSS15P98073 1019 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 TRPC3Q13507 836 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 RABGAP1LQ5R372 815 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 ATG9AQ7Z3C6 839 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 RHOT2Q8IXI1 618 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 SNRNP27Q8WVK2 155 aaKnown RBP15.25■□□□□ 0.03
HDAC7-219ENST00000470668 GPR101Q96P66 508 aaPredicted RBP15.25■□□□□ 0.03
HDAC7-219ENST00000470668 CYP4F11Q9HBI6 524 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 USP31Q70CQ4 1352 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 PIK3C2BO00750 1634 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 BAZ2BQ9UIF8 2168 aaKnown RBP15.25■□□□□ 0.03
HDAC7-219ENST00000470668 DKC1O60832 514 aaKnown RBP eCLIP15.25■□□□□ 0.036e-12■■■■□ 20.7
HDAC7-219ENST00000470668 AP1G2O75843 785 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 ARFIP2P53365 341 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 PDE1BQ01064 536 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 ANKRD20A8PQ5CZ79 823 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 SCYL2Q6P3W7 929 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 THEGQ9P2T0 379 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 PLAGL2Q9UPG8 496 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 BCS1LQ9Y276 419 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 ANKARQ7Z5J8 1434 aa15.25■□□□□ 0.03
HDAC7-219ENST00000470668 SSU72P8A0A1W2PR75 194 aa15.24■□□□□ 0.03
HDAC7-219ENST00000470668 GOLGA8RI6L899 631 aa15.24■□□□□ 0.03
HDAC7-219ENST00000470668 DPP8Q6V1X1 898 aaPredicted RBP15.24■□□□□ 0.03
HDAC7-219ENST00000470668 RNF207Q6ZRF8 634 aa15.24■□□□□ 0.03
HDAC7-219ENST00000470668 CPXCR1Q8N123 301 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms