RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 LRRFIP2Q9Y608 721 aaKnown RBP8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 ADAMTSL1Q8N6G6 1762 aa8.34□□□□□ -1.07
PTP4A1-202ENST00000470661 UTYO14607 1347 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 PTPRCP08575 1304 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 EFEMP2O95967 443 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 GSTM1P09488 218 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 HSPA1AP0DMV8 641 aaKnown RBP8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 HSPA1BP0DMV9 641 aaKnown RBP8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 RFX5P48382 616 aaPredicted RBP8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 DEFB115Q30KQ5 88 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 RTP2Q5QGT7 225 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 ANKS4BQ8N8V4 417 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 JMYQ8N9B5 988 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 MICAL1Q8TDZ2 1067 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 ERVK13-1Q9NX77 482 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 GGA3Q9NZ52 723 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 APEX2Q9UBZ4 518 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 PGAP2Q9UHJ9 254 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 GPR160Q9UJ42 338 aa8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 SF3B6Q9Y3B4 125 aaKnown RBP8.33□□□□□ -1.08
PTP4A1-202ENST00000470661 NOTOA8MTQ0 251 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 PSPNO60542 156 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 PPM1BO75688 479 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 CD3EP07766 207 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 ZNF280AP59817 542 aaPredicted RBP8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 CHRNEQ04844 493 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 CHAF1AQ13111 956 aaPredicted RBP8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 PRKG1Q13976 671 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 METTL24Q5JXM2 366 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 MPZL3Q6UWV2 235 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 CEP128Q6ZU80 1094 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 HNRNPLLQ8WVV9 542 aaKnown RBP8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 FAM84BQ96KN1 310 aaPredicted RBP8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 FCRL2Q96LA5 508 aaPredicted RBP8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 COA1Q9GZY4 146 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 MYOZ2Q9NPC6 264 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 GPR55Q9Y2T6 319 aaPredicted RBP8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 CNTNAP1P78357 1384 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 MED23Q9ULK4 1368 aa8.32□□□□□ -1.08
PTP4A1-202ENST00000470661 CLRN2A0PK11 232 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 ANKRD34BA5PLL1 514 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 FOXN1O15353 648 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 TRIM27P14373 513 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 IFNGR1P15260 489 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 RPS12P25398 132 aaKnown RBP8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 NCAPHQ15003 741 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 RABL6Q3YEC7 729 aaPredicted RBP8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 OGFOD2Q6N063 350 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 ATG9AQ7Z3C6 839 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 SPPL2CQ8IUH8 684 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 FAM178BQ8IXR5 827 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 AGBL3Q8NEM8 1001 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 DCPSQ96C86 337 aaKnown RBP8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 CAPNS2Q96L46 248 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 CGGBP1Q9UFW8 167 aaPredicted RBP8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 DIS3Q9Y2L1 958 aaKnown RBP8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 SUGT1Q9Y2Z0 365 aa8.31□□□□□ -1.08
PTP4A1-202ENST00000470661 WDR33Q9C0J8 1336 aaKnown RBP8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 LRRC10BA6NIK2 292 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 RASSF10A6NK89 507 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 UBE2Q2LH0YL09 131 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 WNT10BO00744 389 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 UBTFL1P0CB47 393 aaPredicted RBP8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 ADORA1P30542 326 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 HIBADHP31937 336 aaKnown RBP8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 NR0B2Q15466 257 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 SLC14A2Q15849 920 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 MLANAQ16655 118 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 STRIP1Q5VSL9 837 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 PRR23BQ6ZRT6 265 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 SAPCD2Q86UD0 394 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 SIRT2Q8IXJ6 389 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 LILRA2Q8N149 483 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 TMEM57Q8N5G2 664 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 ZNF513Q8N8E2 541 aaPredicted RBP8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 CDCA5Q96FF9 252 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 PRMT6Q96LA8 375 aaPredicted RBP8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 FCRL3Q96P31 734 aaPredicted RBP8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 MCMBPQ9BTE3 642 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 LGR4Q9BXB1 951 aa8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 API5Q9BZZ5 524 aaKnown RBP8.3□□□□□ -1.08
PTP4A1-202ENST00000470661 DDAH1O94760 285 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 IL1R1P14778 569 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 KIR2DL1P43626 348 aaPredicted RBP8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 KIR2DL2P43627 348 aaPredicted RBP8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 RBM5P52756 815 aaKnown RBP eCLIP8.29□□□□□ -1.082e-6■□□□□ 9.9
PTP4A1-202ENST00000470661 HUNKP57058 714 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 RTP1P59025 263 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 DPY19L1Q2PZI1 675 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 ANKS3Q6ZW76 656 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 ZNF804AQ7Z570 1209 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 CELF2-AS1Q8N7Q2 184 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 VGLL2Q8N8G2 317 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 NAT16Q8N8M0 369 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 TDRD7Q8NHU6 1098 aaKnown RBP8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 PANK1Q8TE04 598 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 PPP1R14AQ96A00 147 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 DIRC2Q96SL1 478 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 PLCD4Q9BRC7 762 aa8.29□□□□□ -1.08
PTP4A1-202ENST00000470661 PNMA6EA0A0J9YXQ4 647 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms