RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 RRP36Q96EU6 259 aaKnown RBP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 SEC16BQ96JE7 1060 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 FAM161BQ96MY7 647 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 OLFM3Q96PB7 478 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 SLX1AQ9BQ83 275 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 PYM1Q9BRP8 204 aaKnown RBP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 NUP58Q9BVL2 599 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 OSBPL1AQ9BXW6 950 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 YIPF3Q9GZM5 350 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 STMN4Q9H169 189 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 SIL1Q9H173 461 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 IRF2BPLQ9H1B7 796 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 EPC1Q9H2F5 836 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 PCDH12Q9NPG4 1184 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 TBCCD1Q9NVR7 557 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 CXXC1Q9P0U4 656 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 BARX2Q9UMQ3 279 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 SLC12A4Q9UP95 1085 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 COMMD3-BMI1R4GMX3 469 aa5.31□□□□□ -1.56
SF3B1-207ENST00000468925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.31□□□□□ -1.56
SF3B1-207ENST00000468925 KIF1BO60333 1816 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 N4BP2Q86UW6 1770 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 ABCC6O95255 1503 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 ATP7AQ04656 1500 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 SYCP2Q9BX26 1530 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 F8W735 103 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 GCOM1H8Y6P7 765 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 O00370 1275 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 SPTLC2O15270 562 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 USO1O60763 962 aaKnown RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 WISP1O95388 367 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 PYGLP06737 847 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 FAM163BP0C2L3 166 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 LINGO3P0C6S8 592 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 MYZAPP0CAP1 466 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 PDHBP11177 359 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 ZNF18P17022 549 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 EIF2S2P20042 333 aaKnown RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 ATP6V1C1P21283 382 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 SMARCA1P28370 1054 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 RXRBP28702 533 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 CYLC1P35663 651 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 RASSF2P50749 326 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 PHEXP78562 749 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 MTX1Q13505 466 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 KPNB1Q14974 876 aaKnown RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 E2F5Q15329 346 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 TAF11Q15544 211 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 ADRM1Q16186 407 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 SPDYAQ5MJ70 313 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 NT5DC1Q5TFE4 455 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 CREB3L3Q68CJ9 461 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 NCAPH2Q6IBW4 605 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 HIBCHQ6NVY1 386 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 KLC3Q6P597 504 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 ADAMTSL4Q6UY14 1074 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 PRR23CQ6ZRP0 262 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 UNC13DQ70J99 1090 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 CPLX4Q7Z7G2 160 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 FERMT3Q86UX7 667 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 ATCAYQ86WG3 371 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 IQCKQ8N0W5 287 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 LINC00301Q8NCQ3 95 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 PIP4K2CQ8TBX8 421 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 SSH3Q8TE77 659 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 STAMBPL1Q96FJ0 436 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 ZNF274Q96GC6 653 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 FGD4Q96M96 766 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 SLF1Q9BQI6 1058 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 KRT23Q9C075 422 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 RAB17Q9H0T7 212 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 PLEKHA4Q9H4M7 779 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 TAF1DQ9H5J8 278 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 LZTFL1Q9NQ48 299 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 PLCB1Q9NQ66 1216 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 EXOC1Q9NV70 894 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 HAUS2Q9NVX0 235 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 BABAM1Q9NWV8 329 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 MIS18AQ9NYP9 233 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 SPATA7Q9P0W8 599 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 SAMD15Q9P1V8 674 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 STIM2Q9P246 746 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 KANSL3Q9P2N6 904 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 SEPT3Q9UH03 358 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 PCDHA7Q9UN72 937 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 ZNF510Q9Y2H8 683 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 LUC7L2Q9Y383 392 aaKnown RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.3□□□□□ -1.56
SF3B1-207ENST00000468925 RIMS2Q9UQ26 1411 aa5.3□□□□□ -1.56
SF3B1-207ENST00000468925 JCADQ9P266 1359 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ADGRB3O60242 1522 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ABCC1P33527 1531 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 NEXMIFQ5QGS0 1516 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 IFT172Q9UG01 1749 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 GRID2IPA4D2P6 1211 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 TMEM221A6NGB7 291 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 F8VZ95 297 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 N4BP3O15049 544 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 STRNO43815 780 aa5.29□□□□□ -1.56
SF3B1-207ENST00000468925 ORC4O43929 436 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms