RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 NR1I2O75469 434 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 CD4P01730 458 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 LIG1P18858 919 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 EHHADHQ08426 723 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 KLHL40Q2TBA0 621 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 SKOR2Q2VWA4 1001 aaPredicted RBP12.54□□□□□ -0.4
MSH5-214ENST00000468602 ARSHQ5FYA8 562 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 PADI6Q6TGC4 694 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 MTHFD1LQ6UB35 978 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 SLC39A5Q6ZMH5 540 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 RBM43Q6ZSC3 357 aaKnown RBP12.54□□□□□ -0.4
MSH5-214ENST00000468602 NECAB2Q7Z6G3 386 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 SERINC5Q86VE9 423 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 C7orf31Q8N865 590 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 PIGOQ8TEQ8 1089 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 LMBR1Q8WVP7 490 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 DNAJC19Q96DA6 116 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 CEP170P1Q96L14 293 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 NTPCRQ9BSD7 190 aaKnown RBP12.54□□□□□ -0.4
MSH5-214ENST00000468602 TRIM9Q9C026 710 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 XPNPEP1Q9NQW7 623 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 HDAC6Q9UBN7 1215 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 BRCA2P51587 3418 aa12.54□□□□□ -0.4
MSH5-214ENST00000468602 TRIP12Q14669 1992 aaPredicted RBP12.53□□□□□ -0.4
MSH5-214ENST00000468602 PVALEFA0A1B0GWK0 134 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 C17orf102A2RUQ5 167 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 ARHGEF35A5YM69 484 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 ASAP2O43150 1006 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 MAPTP10636 758 aaKnown RBP12.53□□□□□ -0.4
MSH5-214ENST00000468602 ARL2P36404 184 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 NPEPPSP55786 919 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 SOX10P56693 466 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 HIC1Q14526 733 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 XKR9Q5GH70 373 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 IER5Q5VY09 327 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 IFNLR1Q8IU57 520 aaPredicted RBP12.53□□□□□ -0.4
MSH5-214ENST00000468602 FAM126BQ8IXS8 530 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 CKAP2LQ8IYA6 745 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 CEP57L1Q8IYX8 460 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 PDILTQ8N807 584 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 RETREG2Q8NC44 543 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 GPT2Q8TD30 523 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 TCP11Q8WWU5 503 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 SLC7A3Q8WY07 619 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 KIFAP3Q92845 792 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 PAGE5Q96GU1 130 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 NFKBIZQ9BYH8 718 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 GTPBP4Q9BZE4 634 aaKnown RBP12.53□□□□□ -0.4
MSH5-214ENST00000468602 C11orf49Q9H6J7 331 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 ATP6V0A4Q9HBG4 840 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 DACT1Q9NYF0 836 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 SEPT9Q9UHD8 586 aaPredicted RBP12.53□□□□□ -0.4
MSH5-214ENST00000468602 SERTAD1Q9UHV2 236 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 TRPC6Q9Y210 931 aa12.53□□□□□ -0.4
MSH5-214ENST00000468602 GTPBP6O43824 516 aaPredicted RBP12.52□□□□□ -0.41
MSH5-214ENST00000468602 KINO60870 393 aaKnown RBP12.52□□□□□ -0.41
MSH5-214ENST00000468602 KLRC1P26715 233 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 SARSP49591 514 aaKnown RBP12.52□□□□□ -0.41
MSH5-214ENST00000468602 TBC1D8BQ0IIM8 1120 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 DPYDQ12882 1025 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 MAPK7Q13164 816 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 PTK7Q13308 1070 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 MKRN4PQ13434 485 aaPredicted RBP12.52□□□□□ -0.41
MSH5-214ENST00000468602 GIT2Q14161 759 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 MCM6Q14566 821 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 MXD4Q14582 209 aaPredicted RBP12.52□□□□□ -0.41
MSH5-214ENST00000468602 TRIM71Q2Q1W2 868 aaKnown RBP12.52□□□□□ -0.41
MSH5-214ENST00000468602 DAW1Q8N136 415 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 SLC17A8Q8NDX2 589 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 CNNM3Q8NE01 707 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 SPIRE2Q8WWL2 714 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 DHX58Q96C10 678 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 ST6GALNAC4Q9H4F1 302 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 OLFML3Q9NRN5 406 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 BMP2KQ9NSY1 1161 aaPredicted RBP12.52□□□□□ -0.41
MSH5-214ENST00000468602 SETD4Q9NVD3 440 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 SEL1LQ9UBV2 794 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 HOOK1Q9UJC3 728 aaKnown RBP12.52□□□□□ -0.41
MSH5-214ENST00000468602 TUBE1Q9UJT0 475 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 SQORQ9Y6N5 450 aa12.52□□□□□ -0.41
MSH5-214ENST00000468602 EVPLQ92817 2033 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 MYMKA6NI61 221 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 MARK3P27448 753 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 TMOD1P28289 359 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 ABCD1P33897 745 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 KCNB1Q14721 858 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 EMC2Q15006 297 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 PCBP1Q15365 356 aaKnown RBP eCLIP12.51□□□□□ -0.41
MSH5-214ENST00000468602 MTERF2Q49AM1 385 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 COBLL1Q53SF7 1204 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 FAM26DQ5JW98 314 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 PLA2G4FQ68DD2 849 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 GDF6Q6KF10 455 aaPredicted RBP12.51□□□□□ -0.41
MSH5-214ENST00000468602 KIAA0319LQ8IZA0 1049 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 RASSF8Q8NHQ8 419 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 CAGE1Q8TC20 777 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 DDX12PQ92771 950 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 DRC1Q96MC2 740 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 GSDMAQ96QA5 445 aa12.51□□□□□ -0.41
MSH5-214ENST00000468602 RUSC1Q9BVN2 902 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms