RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 ZNF571Q7Z3V5 609 aaPredicted RBP16.1■□□□□ 0.17
PRPF38B-204ENST00000467302 FRMD5Q7Z6J6 570 aa16.1■□□□□ 0.17
PRPF38B-204ENST00000467302 LRRC57Q8N9N7 239 aa16.1■□□□□ 0.17
PRPF38B-204ENST00000467302 EIF1ADQ8N9N8 165 aaKnown RBP16.1■□□□□ 0.17
PRPF38B-204ENST00000467302 FZD9O00144 591 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 PIK3CDO00329 1044 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 OPLAHO14841 1288 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 ZBTB48P10074 688 aaPredicted RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 UCHL3P15374 230 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 TAL1P17542 331 aaPredicted RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 HOXD13P35453 343 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 SREBF1P36956 1147 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 STAT3P40763 770 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 EPS15P42566 896 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 GMPSP49915 693 aaPredicted RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 ZYXQ15942 572 aaKnown RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 Q4G0T1 1027 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 TTC19Q6DKK2 380 aaPredicted RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 EPM2AIP1Q7L775 607 aaPredicted RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 MICALL2Q8IY33 904 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 UIMC1Q96RL1 719 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 RANBP17Q9H2T7 1088 aaKnown RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 GINM1Q9NU53 330 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 BZW2Q9Y6E2 419 aaKnown RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 FAM169AQ9Y6X4 670 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 POTEFA5A3E0 1075 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 BHMG1C9JSJ3 638 aaPredicted RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 POTEIP0CG38 1075 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 SLC9A1P19634 815 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 HOXA13P31271 388 aaPredicted RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 HSPA9P38646 679 aaKnown RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 GUCY2FP51841 1108 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 TNNC1P63316 161 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 PDCLQ13371 301 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 GIT2Q14161 759 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 RPS6KA1Q15418 735 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 ENOX2Q16206 610 aaKnown RBP16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 PRR16Q569H4 304 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 KCTD16Q68DU8 428 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 POTEGQ6S5H5 508 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 POTEEQ6S8J3 1075 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 ETNPPLQ8TBG4 499 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 SCFD2Q8WU76 684 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 NENFQ9UMX5 172 aa16.09■□□□□ 0.17
PRPF38B-204ENST00000467302 TBX3O15119 743 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 ZEB2O60315 1214 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 KIF4AO95239 1232 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 PON1P27169 355 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 PRKCIP41743 596 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 RNASE9P60153 205 aaKnown RBP16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 KNOP1Q1ED39 458 aaKnown RBP16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 CCDC174Q6PII3 467 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 CATSPER3Q86XQ3 398 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 ACTRT1Q8TDG2 376 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 PBKQ96KB5 322 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 TEPSINQ96N21 525 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 ISCUQ9H1K1 167 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 ARMCX3Q9UH62 379 aaPredicted RBP16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 NAGPAQ9UK23 515 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 ATP8B3O60423 1300 aa16.08■□□□□ 0.16
PRPF38B-204ENST00000467302 PHF20L1A8MW92 1017 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 AFPP02771 609 aaKnown RBP16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 ECHS1P30084 290 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 CIITAP33076 1130 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 PTGER2P43116 358 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 RBM46Q8TBY0 533 aaKnown RBP16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 TAF4BQ92750 862 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 RNPC3Q96LT9 517 aaKnown RBP16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 TAF1DQ9H5J8 278 aaPredicted RBP16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 RABEP2Q9H5N1 569 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 FBXL5Q9UKA1 691 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 SCAF8Q9UPN6 1271 aaKnown RBP16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 KCNK3O14649 394 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 EGFRP00533 1210 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 KRT18P05783 430 aaKnown RBP16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 SPATA31C1P0DKV0 1188 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 ANXA13P27216 316 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 ZNF76P36508 570 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 PSMC6P62333 389 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 ERVK-9P63128 1117 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 EXOC3L4Q17RC7 722 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 SYT2Q8N9I0 419 aaPredicted RBP16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 FAM20AQ96MK3 541 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 GLIS2Q9BZE0 524 aaPredicted RBP16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 GJA3Q9Y6H8 435 aa16.07■□□□□ 0.16
PRPF38B-204ENST00000467302 FAM86B1E9PN63 330 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 GCOM1H8Y6P7 765 aaPredicted RBP16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 PDXKO00764 312 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 CFBP00751 764 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 CYP3A4P08684 503 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 FAM86B2P0C5J1 330 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 POLR2MP0CAP2 368 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 RPA1P27694 616 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 ATP1A2P50993 1020 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 EPHA7Q15375 998 aa16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 IFI16Q16666 785 aaKnown RBP16.06■□□□□ 0.16
PRPF38B-204ENST00000467302 KLHL7Q8IXQ5 586 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms