RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 MRIQ9BWK5 157 aa4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 PUF60Q9UHX1 559 aaKnown RBP4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 CTDP1Q9Y5B0 961 aaPredicted RBP4.68□□□□□ -1.66
GTF3C3-209ENST00000466862 NPIPB8E9PQR5 432 aa4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 SLC26A4O43511 780 aa4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 GLRX3O76003 335 aaKnown RBP4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 FNTBP49356 437 aa4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 HMGA2P52926 109 aa4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 PTH1RQ03431 593 aa4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 CC2D1AQ6P1N0 951 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 EP400NLQ6ZTU2 488 aa4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 HIPK4Q8NE63 616 aa4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 OR14K1Q8NGZ2 314 aa4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 CLUHP3Q96NS8 147 aa4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 BOCQ9BWV1 1114 aa4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 HAPLN2Q9GZV7 340 aa4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 HECAQ9UBI9 543 aaPredicted RBP4.67□□□□□ -1.66
GTF3C3-209ENST00000466862 PLD2O14939 933 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 NARSO43776 548 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 C1SP09871 688 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 APEX1P27695 318 aaKnown RBP4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 MSX2P35548 267 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 MEOX1P50221 254 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 DGCR2P98153 550 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 CREB3L3Q68CJ9 461 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 RTKN2Q8IZC4 609 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 AMER2Q8N7J2 671 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 OR5AN1Q8NGI8 311 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 FAM89AQ96GI7 184 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 NELFAQ9H3P2 528 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 TLR9Q9NR96 1032 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 PLA2G3Q9NZ20 509 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 PPP1R1BQ9UD71 204 aaPredicted RBP4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 VWA7Q9Y334 891 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 HS3ST3A1Q9Y663 406 aa4.66□□□□□ -1.66
GTF3C3-209ENST00000466862 HIP1RO75146 1068 aa4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 DNAJC8O75937 253 aaPredicted RBP4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 SQSTM1Q13501 440 aa4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 RIN1Q13671 783 aa4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 TMEM132BQ14DG7 1078 aa4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 NRN1LQ496H8 165 aa4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 SPTY2D1Q68D10 685 aaPredicted RBP4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 ZCCHC8Q6NZY4 707 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 USP51Q70EK9 711 aa4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 CHST14Q8NCH0 376 aa4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 SHCBP1Q8NEM2 672 aa4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 NKD2Q969F2 451 aaPredicted RBP4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 MENTQ9BUN1 341 aa4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 OSBPL2Q9H1P3 480 aa4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 C12orf65Q9H3J6 166 aaKnown RBP4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 CEP72Q9P209 647 aa4.65□□□□□ -1.67
GTF3C3-209ENST00000466862 KRTAP23-1A1A580 65 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 M0R2C6 588 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 ZNF202O95125 648 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 RAPGEF3O95398 923 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 RGS3P49796 1198 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 ADAM15Q13444 863 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 ZNF460Q14592 562 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 FNDC7Q5VTL7 733 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 C2orf69Q8N8R5 385 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 CALML6Q8TD86 181 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 RABGGTAQ92696 567 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 C16orf92Q96LL3 132 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 SLITRK6Q9H5Y7 841 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 ZNF703Q9H7S9 590 aaPredicted RBP4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 PODXL2Q9NZ53 605 aa4.64□□□□□ -1.67
GTF3C3-209ENST00000466862 TRAF5O00463 557 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 IGFALSP35858 605 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 STAT3P40763 770 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 ADCY7P51828 1080 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 MAP3K12Q12852 859 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 GRM7Q14831 915 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 SF3A1Q15459 793 aaKnown RBP4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 FNDC3BQ53EP0 1204 aaKnown RBP4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 CRB2Q5IJ48 1285 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 SOGA3Q5TF21 947 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 KLHDC10Q6PID8 442 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 ADGRE4PQ86SQ3 457 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 C1orf210Q8IVY1 113 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 PMFBP1Q8TBY8 1022 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 GPHA2Q96T91 129 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 ZNF341Q9BYN7 854 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 KANSL2Q9H9L4 492 aa4.63□□□□□ -1.67
GTF3C3-209ENST00000466862 KIF11P52732 1056 aa4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 ANTXR2P58335 489 aa4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 ABHD18Q0P651 414 aa4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 MYBPC3Q14896 1274 aa4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 ARHGAP44Q17R89 818 aa4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 ESRP1Q6NXG1 681 aaKnown RBP4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 PCSK4Q6UW60 755 aa4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 ERCC4Q92889 916 aaPredicted RBP4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 LPPQ93052 612 aa4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 SLC7A6OSQ96CW6 309 aaPredicted RBP4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 MAML3Q96JK9 1138 aa4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 SAMD15Q9P1V8 674 aa4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 FAM184BQ9ULE4 1060 aa4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 CDK11AQ9UQ88 783 aaPredicted RBP4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 SH3BP1Q9Y3L3 701 aa4.62□□□□□ -1.67
GTF3C3-209ENST00000466862 UBA6A0AVT1 1052 aaPredicted RBP4.61□□□□□ -1.67
GTF3C3-209ENST00000466862 C2orf78A6NCI8 922 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms