RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 TNFRSF18Q9Y5U5 241 aa3.58□□□□□ -1.84
CCDC93-205ENST00000466171 PRAMEF22A3QJZ6 481 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 ZNF561-AS1K7EIQ3 104 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 SCDO00767 359 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 KCNK3O14649 394 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 FOXP2O15409 715 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 PDPK1O15530 556 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 MMEP08473 750 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 ZC3H6P61129 1189 aaKnown RBP3.57□□□□□ -1.84
CCDC93-205ENST00000466171 SSRP1Q08945 709 aaKnown RBP3.57□□□□□ -1.84
CCDC93-205ENST00000466171 MTERF2Q49AM1 385 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 DPY19L2P1Q6NXN4 242 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 LRSAM1Q6UWE0 723 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 ZBTB38Q8NAP3 1195 aaPredicted RBP3.57□□□□□ -1.84
CCDC93-205ENST00000466171 GFM2Q969S9 779 aaKnown RBP3.57□□□□□ -1.84
CCDC93-205ENST00000466171 E2F7Q96AV8 911 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 GMLQ99445 158 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 TTPALQ9BTX7 342 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 PCDHA9Q9Y5H5 950 aa3.57□□□□□ -1.84
CCDC93-205ENST00000466171 GOLGA8BA8MQT2 603 aa3.56□□□□□ -1.84
CCDC93-205ENST00000466171 EFCAB14O75071 495 aa3.56□□□□□ -1.84
CCDC93-205ENST00000466171 MAFO75444 373 aaPredicted RBP3.56□□□□□ -1.84
CCDC93-205ENST00000466171 STK10O94804 968 aaKnown RBP3.56□□□□□ -1.84
CCDC93-205ENST00000466171 CRTAMO95727 393 aa3.56□□□□□ -1.84
CCDC93-205ENST00000466171 MAN2A2P49641 1150 aa3.56□□□□□ -1.84
CCDC93-205ENST00000466171 KRTAP15-1Q3LI76 137 aa3.56□□□□□ -1.84
CCDC93-205ENST00000466171 ZNF627Q7L945 461 aa3.56□□□□□ -1.84
CCDC93-205ENST00000466171 CISD2Q8N5K1 135 aaKnown RBP3.56□□□□□ -1.84
CCDC93-205ENST00000466171 ASB15Q8WXK1 588 aa3.56□□□□□ -1.84
CCDC93-205ENST00000466171 GCDHQ92947 438 aaPredicted RBP3.56□□□□□ -1.84
CCDC93-205ENST00000466171 SLC7A6OSQ96CW6 309 aaPredicted RBP3.56□□□□□ -1.84
CCDC93-205ENST00000466171 AGAP2Q99490 1192 aa3.56□□□□□ -1.84
CCDC93-205ENST00000466171 SLC6A15Q9H2J7 730 aa3.56□□□□□ -1.84
CCDC93-205ENST00000466171 NRDE2Q9H7Z3 1164 aa3.56□□□□□ -1.84
CCDC93-205ENST00000466171 SMURF1Q9HCE7 757 aa3.56□□□□□ -1.84
CCDC93-205ENST00000466171 SAE1Q9UBE0 346 aaPredicted RBP3.56□□□□□ -1.84
CCDC93-205ENST00000466171 PPP1R1BQ9UD71 204 aaPredicted RBP3.56□□□□□ -1.84
CCDC93-205ENST00000466171 SLC12A8A0AV02 714 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 TRAF5O00463 557 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 FOXN1O15353 648 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 PPFIA4O75335 1185 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 RHOBTB3O94955 611 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 C6orf222P0C671 652 aaPredicted RBP3.55□□□□□ -1.84
CCDC93-205ENST00000466171 SDHAP31040 664 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 SMAD3P84022 425 aaKnown RBP3.55□□□□□ -1.84
CCDC93-205ENST00000466171 ATP2C1P98194 919 aaPredicted RBP3.55□□□□□ -1.84
CCDC93-205ENST00000466171 ADAM15Q13444 863 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 RASGRF1Q13972 1273 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 TMEM132BQ14DG7 1078 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 ZC3H12BQ5HYM0 836 aaKnown RBP3.55□□□□□ -1.84
CCDC93-205ENST00000466171 FAM209AQ5JX71 171 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 SPTY2D1Q68D10 685 aaPredicted RBP3.55□□□□□ -1.84
CCDC93-205ENST00000466171 LAIR1Q6GTX8 287 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 SPATC1Q76KD6 591 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 SYNE4Q8N205 404 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 HAS1Q92839 578 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 NAF1Q96HR8 494 aaKnown RBP3.55□□□□□ -1.84
CCDC93-205ENST00000466171 DHRS4Q9BTZ2 278 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 AGO3Q9H9G7 860 aaKnown RBP3.55□□□□□ -1.84
CCDC93-205ENST00000466171 PFDN2Q9UHV9 154 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 SH3BP1Q9Y3L3 701 aa3.55□□□□□ -1.84
CCDC93-205ENST00000466171 CTDP1Q9Y5B0 961 aaPredicted RBP3.55□□□□□ -1.84
CCDC93-205ENST00000466171 PCSK5Q92824 1860 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 GOLGA6L6A8MZA4 724 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 GOLGA6L22H0YM25 854 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 ADCY3O60266 1144 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 MFAP3LO75121 409 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 RPS6KA4O75676 772 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 NPTXRO95502 500 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 BMP5P22003 454 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 ADCY7P51828 1080 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 FSTL1Q12841 308 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 LONRF2Q1L5Z9 754 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 MFSD5Q6N075 450 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 FAM111BQ6SJ93 734 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 NOSTRINQ8IVI9 506 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 ERCC4Q92889 916 aaPredicted RBP3.54□□□□□ -1.84
CCDC93-205ENST00000466171 MAGEB10Q96LZ2 347 aaPredicted RBP3.54□□□□□ -1.84
CCDC93-205ENST00000466171 TCF25Q9BQ70 676 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 GPR87Q9BY21 358 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 CELF4Q9BZC1 486 aaKnown RBP3.54□□□□□ -1.84
CCDC93-205ENST00000466171 CCDC113Q9H0I3 377 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 PODXL2Q9NZ53 605 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 NDOR1Q9UHB4 597 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 RCAN3Q9UKA8 241 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 DENND2AQ9ULE3 1009 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 MSRB2Q9Y3D2 182 aa3.54□□□□□ -1.84
CCDC93-205ENST00000466171 RBM8AQ9Y5S9 174 aaKnown RBP3.54□□□□□ -1.84
CCDC93-205ENST00000466171 CCDC85CA6NKD9 419 aa3.53□□□□□ -1.84
CCDC93-205ENST00000466171 RGS19P49795 217 aa3.53□□□□□ -1.84
CCDC93-205ENST00000466171 SCNN1GP51170 649 aa3.53□□□□□ -1.84
CCDC93-205ENST00000466171 BPIFB4P59827 614 aa3.53□□□□□ -1.84
CCDC93-205ENST00000466171 ALDH6A1Q02252 535 aaKnown RBP3.53□□□□□ -1.84
CCDC93-205ENST00000466171 ROM1Q03395 351 aa3.53□□□□□ -1.84
CCDC93-205ENST00000466171 SEC23AQ15436 765 aa3.53□□□□□ -1.84
CCDC93-205ENST00000466171 ELAVL1Q15717 326 aaKnown RBP3.53□□□□□ -1.84
CCDC93-205ENST00000466171 DGKDQ16760 1214 aa3.53□□□□□ -1.84
CCDC93-205ENST00000466171 GAGE13Q4V321 117 aa3.53□□□□□ -1.84
CCDC93-205ENST00000466171 KRT40Q6A162 431 aa3.53□□□□□ -1.84
CCDC93-205ENST00000466171 Q6ZRM9 215 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms