RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 VWA3BQ502W6 1294 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 HAUS6Q7Z4H7 955 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 C17orf53Q8N3J3 647 aaPredicted RBP4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 RDH13Q8NBN7 331 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 BRI3BPQ8WY22 251 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 POMGNT1Q8WZA1 660 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 DNAJC19Q96DA6 116 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 CCDC42Q96M95 316 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 FNBP1Q96RU3 617 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 SENP7Q9BQF6 1050 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 CRACR2AQ9BSW2 395 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 LSM14BQ9BX40 385 aaKnown RBP4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 NAA15Q9BXJ9 866 aaKnown RBP4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 POLR3FQ9H1D9 316 aaPredicted RBP4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 OLFML3Q9NRN5 406 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 RBPJLQ9UBG7 517 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 ADAMTS5Q9UNA0 930 aa4.52□□□□□ -1.69
ATP13A3-206ENST00000461660 DENND3A2RUS2 1198 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 TEX33O43247 280 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 ABCB7O75027 752 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 PHACTR2O75167 634 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 AFPP02771 609 aaKnown RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 CCDC172P0C7W6 258 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 INHBEP58166 350 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 GHRHRQ02643 423 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 NCBP1Q09161 790 aaKnown RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 RAPGEF1Q13905 1077 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 CYP26C1Q6V0L0 522 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 GBP6Q6ZN66 633 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 FAM133AQ8N9E0 248 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 SMC1BQ8NDV3 1235 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 KIF18AQ8NI77 898 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 TCP11Q8WWU5 503 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 PSPC1Q8WXF1 523 aaKnown RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 PDCL3Q9H2J4 239 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 SMARCAD1Q9H4L7 1026 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 SEPT11Q9NVA2 429 aaKnown RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 PYCARDQ9ULZ3 195 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 ECM29Q5VYK3 1845 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 STX10O60499 249 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 N4BP1O75113 896 aaKnown RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 LYPLA2O95372 231 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 CCNE2O96020 404 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 CASP14P31944 242 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 TCF7P36402 384 aaPredicted RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 USP8P40818 1118 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 RFC5P40937 340 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 KRT83P78385 493 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 ARID5AQ03989 594 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 LAMC2Q13753 1193 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 ARID5BQ14865 1188 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 EMC2Q15006 297 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 FAM110CQ1W6H9 321 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 ARMCX2Q7L311 632 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 FMNL3Q8IVF7 1028 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 MNS1Q8NEH6 495 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 SCFD1Q8WVM8 642 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 NUCKS1Q9H1E3 243 aaKnown RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 PORCNQ9H237 461 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 SEMA6BQ9H3T3 888 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 TXNRD2Q9NNW7 524 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 VTA1Q9NP79 307 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 NLRC4Q9NPP4 1024 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 RRAGDQ9NQL2 400 aaPredicted RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 CYP26B1Q9NR63 512 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 GINS2Q9Y248 185 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 SLC45A1Q9Y2W3 748 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 SRCAPQ6ZRS2 3230 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 CDK5RAP2Q96SN8 1893 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 LOC102724159A0A0B4J2E5 919 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 A0A1W2PQC6 194 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 SOWAHBA6NEL2 793 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 INO80B-WBP1J3KQ70 363 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 K7ERI5 159 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 ZBTB39O15060 712 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 ZNF500O60304 480 aaPredicted RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 MFAP3LO75121 409 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 KCNA2P16389 499 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 CYP2B6P20813 491 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 CNGA1P29973 690 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 PMS1P54277 932 aaKnown RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 RBL2Q08999 1139 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 GOLGA8FQ08AF8 430 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 GOLGA8DPQ0D2H9 430 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 BIRC3Q13489 604 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 NR1I3Q14994 352 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 PWP2Q15269 919 aaKnown RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 EXOC3L4Q17RC7 722 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 ZC2HC1CQ53FD0 456 aaPredicted RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 C1orf186Q6ZWK4 172 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 RRAGAQ7L523 313 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 APBB1IPQ7Z5R6 666 aaPredicted RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 CCAR2Q8N163 923 aaKnown RBP4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 XXYLT1Q8NBI6 393 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 OR6J1Q8NGC5 347 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 KIAA1524Q8TCG1 905 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 CCDC127Q96BQ5 260 aa4.51□□□□□ -1.69
ATP13A3-206ENST00000461660 FAM212AQ96EL1 285 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms