RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 POLR3CQ9BUI4 534 aaPredicted RBP18.06■□□□□ 0.48
CD28-203ENST00000458610 PBX4Q9BYU1 374 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 SLC28A3Q9HAS3 691 aa18.06■□□□□ 0.48
CD28-203ENST00000458610 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.06■□□□□ 0.48
CD28-203ENST00000458610 RNF216Q9NWF9 866 aaPredicted RBP18.06■□□□□ 0.48
CD28-203ENST00000458610 CLCN3P51790 818 aa18.05■□□□□ 0.48
CD28-203ENST00000458610 POLGP54098 1239 aaPredicted RBP18.05■□□□□ 0.48
CD28-203ENST00000458610 PAK2Q13177 524 aa18.05■□□□□ 0.48
CD28-203ENST00000458610 LRRC71Q8N4P6 559 aa18.05■□□□□ 0.48
CD28-203ENST00000458610 LINC01465Q8N7H1 131 aa18.05■□□□□ 0.48
CD28-203ENST00000458610 TCP11Q8WWU5 503 aa18.05■□□□□ 0.48
CD28-203ENST00000458610 SCLT1Q96NL6 688 aa18.05■□□□□ 0.48
CD28-203ENST00000458610 NACC1Q96RE7 527 aa18.05■□□□□ 0.48
CD28-203ENST00000458610 LRWD1Q9UFC0 647 aa18.05■□□□□ 0.48
CD28-203ENST00000458610 IGKV6-21A0A0C4DH24 114 aa18.04■□□□□ 0.48
CD28-203ENST00000458610 POTEMA6NI47 508 aa18.04■□□□□ 0.48
CD28-203ENST00000458610 TLL1O43897 1013 aa18.04■□□□□ 0.48
CD28-203ENST00000458610 RPS6KA5O75582 802 aa18.04■□□□□ 0.48
CD28-203ENST00000458610 VTNP04004 478 aa18.04■□□□□ 0.48
CD28-203ENST00000458610 SYT1P21579 422 aa18.04■□□□□ 0.48
CD28-203ENST00000458610 RPA1P27694 616 aa18.04■□□□□ 0.48
CD28-203ENST00000458610 NLRP11P59045 1033 aaKnown RBP18.04■□□□□ 0.48
CD28-203ENST00000458610 NBR1Q14596 966 aa18.04■□□□□ 0.48
CD28-203ENST00000458610 INO80BQ9C086 356 aaPredicted RBP18.04■□□□□ 0.48
CD28-203ENST00000458610 SEMA6BQ9H3T3 888 aa18.04■□□□□ 0.48
CD28-203ENST00000458610 SUCLA2Q9P2R7 463 aaPredicted RBP18.04■□□□□ 0.48
CD28-203ENST00000458610 PADI3Q9ULW8 664 aa18.04■□□□□ 0.48
CD28-203ENST00000458610 SCN5AQ14524 2016 aa18.04■□□□□ 0.48
CD28-203ENST00000458610 ASAP2O43150 1006 aa18.03■□□□□ 0.48
CD28-203ENST00000458610 GPR32O75388 356 aa18.03■□□□□ 0.48
CD28-203ENST00000458610 CD52P31358 61 aa18.03■□□□□ 0.48
CD28-203ENST00000458610 NPEPPSP55786 919 aa18.03■□□□□ 0.48
CD28-203ENST00000458610 NFX1Q12986 1120 aaKnown RBP18.03■□□□□ 0.48
CD28-203ENST00000458610 KIZQ2M2Z5 673 aa18.03■□□□□ 0.48
CD28-203ENST00000458610 ARL6IP4Q66PJ3 421 aaKnown RBP18.03■□□□□ 0.48
CD28-203ENST00000458610 PLA2G4FQ68DD2 849 aa18.03■□□□□ 0.48
CD28-203ENST00000458610 CATSPER3Q86XQ3 398 aa18.03■□□□□ 0.48
CD28-203ENST00000458610 CEP89Q96ST8 783 aa18.03■□□□□ 0.48
CD28-203ENST00000458610 RAD9AQ99638 391 aa18.03■□□□□ 0.48
CD28-203ENST00000458610 GCOM2Q9BZD3 368 aaPredicted RBP18.03■□□□□ 0.48
CD28-203ENST00000458610 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
CD28-203ENST00000458610 WRAP73Q9P2S5 460 aaPredicted RBP18.03■□□□□ 0.48
CD28-203ENST00000458610 TMEM150BA6NC51 233 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 ENPP3O14638 875 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 DGAT1O75907 488 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 GJB5O95377 273 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 EIF4BP23588 611 aaKnown RBP18.02■□□□□ 0.48
CD28-203ENST00000458610 CCT6AP40227 531 aaKnown RBP18.02■□□□□ 0.48
CD28-203ENST00000458610 PBX2P40425 430 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 RABGGTBP53611 331 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 ATP2C1P98194 919 aaPredicted RBP18.02■□□□□ 0.48
CD28-203ENST00000458610 TCTN1Q2MV58 587 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 KRT79Q5XKE5 535 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.02■□□□□ 0.48
CD28-203ENST00000458610 ZNF410Q86VK4 478 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 MYOCDQ8IZQ8 938 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 NLRP7Q8WX94 980 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 SH2D3AQ9BRG2 576 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 ADAMTS10Q9H324 1103 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 ZSCAN16Q9H4T2 348 aaPredicted RBP18.02■□□□□ 0.48
CD28-203ENST00000458610 ZNF576Q9H609 170 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 DHX33Q9H6R0 707 aaKnown RBP18.02■□□□□ 0.48
CD28-203ENST00000458610 AGO3Q9H9G7 860 aaKnown RBP18.02■□□□□ 0.48
CD28-203ENST00000458610 NOC2LQ9Y3T9 749 aaKnown RBP18.02■□□□□ 0.48
CD28-203ENST00000458610 INSL6Q9Y581 213 aa18.02■□□□□ 0.48
CD28-203ENST00000458610 STX6O43752 255 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 STAG3L1P0CL83 205 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 SPATA31C1P0DKV0 1188 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 GPC3P51654 580 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 DEFB103AP81534 67 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 MKRN4PQ13434 485 aaPredicted RBP18.01■□□□□ 0.47
CD28-203ENST00000458610 KCTD17Q8N5Z5 321 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 IGSF22Q8N9C0 903 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 PSPC1Q8WXF1 523 aaKnown RBP18.01■□□□□ 0.47
CD28-203ENST00000458610 TOP1MTQ969P6 601 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 OSMRQ99650 979 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 MTRQ99707 1265 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 OSBPL7Q9BZF2 842 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 NKX2-4Q9H2Z4 354 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 CDHR5Q9HBB8 845 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 MTMR10Q9NXD2 777 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 DBR1Q9UK59 544 aaKnown RBP18.01■□□□□ 0.47
CD28-203ENST00000458610 ST3GAL5Q9UNP4 418 aa18.01■□□□□ 0.47
CD28-203ENST00000458610 MED24O75448 989 aa18■□□□□ 0.47
CD28-203ENST00000458610 SLC34A2O95436 690 aa18■□□□□ 0.47
CD28-203ENST00000458610 ZSCAN20P17040 1043 aaPredicted RBP18■□□□□ 0.47
CD28-203ENST00000458610 MXD4Q14582 209 aaPredicted RBP18■□□□□ 0.47
CD28-203ENST00000458610 EMC2Q15006 297 aa18■□□□□ 0.47
CD28-203ENST00000458610 PPP2R2DQ66LE6 453 aa18■□□□□ 0.47
CD28-203ENST00000458610 Q7L0L9 218 aa18■□□□□ 0.47
CD28-203ENST00000458610 FERMT3Q86UX7 667 aa18■□□□□ 0.47
CD28-203ENST00000458610 RHPN2Q8IUC4 686 aa18■□□□□ 0.47
CD28-203ENST00000458610 TET1Q8NFU7 2136 aa18■□□□□ 0.47
CD28-203ENST00000458610 PPP1R16BQ96T49 567 aa18■□□□□ 0.47
CD28-203ENST00000458610 ATP6V0A4Q9HBG4 840 aa18■□□□□ 0.47
CD28-203ENST00000458610 ERVK-5Q9HDB9 667 aa18■□□□□ 0.47
CD28-203ENST00000458610 C1orf112Q9NSG2 853 aa18■□□□□ 0.47
CD28-203ENST00000458610 YBX2Q9Y2T7 364 aaKnown RBP18■□□□□ 0.47
CD28-203ENST00000458610 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.99■□□□□ 0.47
CD28-203ENST00000458610 DENND3A2RUS2 1198 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms