RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 DDX11Q96FC9 970 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 FUBP3Q96I24 572 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 EXOC2Q96KP1 924 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 KRTAP4-2Q9BYR5 136 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 EHMT1Q9H9B1 1298 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 DBNDD1Q9H9R9 158 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 AGO4Q9HCK5 861 aaKnown RBP4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 GCM1Q9NP62 436 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 C1orf112Q9NSG2 853 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 MRGBPQ9NV56 204 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 RRN3Q9NYV6 651 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 ZNRF3Q9ULT6 936 aa4.58□□□□□ -1.68
HMGB3P30-201ENST00000457863 NCANO14594 1321 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 A0A1W2PQH9 124 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 OR14I1A6ND48 311 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 MEIS3P2A8K0S8 358 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 M0R3H8 397 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 EYA2O00167 538 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 NCAM2O15394 837 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 ZEB2O60315 1214 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 EFEMP2O95967 443 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 INHBBP09529 407 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 IMPDH2P12268 514 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 RHCEP18577 417 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 RPL17P18621 184 aaKnown RBP4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 MCM4P33991 863 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 KRT20P35900 424 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 RECQLP46063 649 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 TM4SF4P48230 202 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 RHDQ02161 417 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 PTPN14Q15678 1187 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 DDB1Q16531 1140 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 INAVAQ3KP66 663 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 RGL3Q3MIN7 710 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 BBS9Q3SYG4 887 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 CDCA2Q69YH5 1023 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 CYP26C1Q6V0L0 522 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 REXO1Q8N1G1 1221 aaKnown RBP4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 USHBP1Q8N6Y0 703 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 NSUN6Q8TEA1 469 aaKnown RBP4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 CCDC138Q96M89 665 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 CFAP53Q96M91 514 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 TTC1Q99614 292 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 CRB3Q9BUF7 120 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 MRPL4Q9BYD3 311 aaKnown RBP4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 WDR12Q9GZL7 423 aaKnown RBP4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 CRTAC1Q9NQ79 661 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 HELLSQ9NRZ9 838 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 EPS15L1Q9UBC2 864 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 GIMAP2Q9UG22 337 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 TCFL5Q9UL49 500 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 PA2G4Q9UQ80 394 aaKnown RBP4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 PCDHB14Q9Y5E9 798 aa4.57□□□□□ -1.68
HMGB3P30-201ENST00000457863 TMEM82A0PJX8 343 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 ANKRD18BA2A2Z9 1011 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 SYNDIG1LA6NDD5 238 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 TRIM64A6NGJ6 449 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 TRIM64BA6NI03 449 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 K7ESF4 209 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 FZD9O00144 591 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 NEMP1O14524 444 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 CPLX1O14810 134 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 TLR3O15455 904 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 SIGLEC6O43699 453 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 MAFKO60675 156 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 USP2O75604 605 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 TIPRLO75663 272 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 DNAJC8O75937 253 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 DDX58O95786 925 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 BAG2O95816 211 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 BPIP17213 487 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 ATF7P17544 494 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 NAT1P18440 290 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 ENDOUP21128 410 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 CASQ1P31415 396 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 CTNNA1P35221 906 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 PCBP3P57721 371 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 PLIN5Q00G26 463 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 IFT88Q13099 833 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 TERF2Q15554 542 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 SEPT7Q16181 437 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 PKN2Q16513 984 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 ABCB5Q2M3G0 1257 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 TTC31Q49AM3 519 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 FAM209AQ5JX71 171 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 CC2D1BQ5T0F9 858 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 GPATCH4Q5T3I0 446 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 WAPLQ7Z5K2 1190 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 TMC3Q7Z5M5 1100 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 SAMD14Q8IZD0 417 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 OR8H1Q8NGG4 311 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 N4BP2L2Q92802 583 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 TRIM63Q969Q1 353 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 TCTN2Q96GX1 697 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 LRGUKQ96M69 825 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 NUDT16L1Q9BRJ7 211 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 LSM14BQ9BX40 385 aaKnown RBP4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 SLC26A6Q9BXS9 759 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 FOXP3Q9BZS1 431 aa4.56□□□□□ -1.68
HMGB3P30-201ENST00000457863 LMAN2LQ9H0V9 348 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms