RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 SH2D3AQ9BRG2 576 aa13.47□□□□□ -0.25
PDGFB-204ENST00000455790 C22orf23Q9BZE7 217 aa13.47□□□□□ -0.25
PDGFB-204ENST00000455790 HCSTQ9UBK5 93 aa13.47□□□□□ -0.25
PDGFB-204ENST00000455790 WDR81Q562E7 1941 aa13.47□□□□□ -0.25
PDGFB-204ENST00000455790 EVPLQ92817 2033 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 MYH9P35579 1960 aaKnown RBP13.46□□□□□ -0.25
PDGFB-204ENST00000455790 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-204ENST00000455790 FAM205CA6NFA0 338 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 CDKL5O76039 1030 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 STBD1O95210 358 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 SEC24BO95487 1268 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 SFNP31947 248 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 SARSP49591 514 aaKnown RBP13.46□□□□□ -0.25
PDGFB-204ENST00000455790 CRYBB1P53674 252 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-204ENST00000455790 DRP2Q13474 957 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 ME3Q16798 604 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 LETM2Q2VYF4 491 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 EARS2Q5JPH6 523 aaKnown RBP13.46□□□□□ -0.25
PDGFB-204ENST00000455790 ERICH6BQ5W0A0 696 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 GALNT17Q6IS24 598 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 EFCAB12Q6NXP0 572 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 MOXD1Q6UVY6 613 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 MIER3Q7Z3K6 550 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 KRT25Q7Z3Z0 450 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 FAM177A1Q8N128 213 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-204ENST00000455790 C11orf84Q9BUA3 381 aaPredicted RBP13.46□□□□□ -0.25
PDGFB-204ENST00000455790 ADAMTS10Q9H324 1103 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 ALG13Q9NP73 1137 aaKnown RBP13.46□□□□□ -0.25
PDGFB-204ENST00000455790 DDX25Q9UHL0 483 aaKnown RBP13.46□□□□□ -0.25
PDGFB-204ENST00000455790 CEP131Q9UPN4 1083 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 AKT3Q9Y243 479 aa13.46□□□□□ -0.25
PDGFB-204ENST00000455790 MYO7AQ13402 2215 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 DENND3A2RUS2 1198 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 C9IYK1 514 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 H3BQ06 376 aaPredicted RBP13.45□□□□□ -0.26
PDGFB-204ENST00000455790 EML1O00423 815 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 MAGEB2O15479 319 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 RB1P06400 928 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 STAG3L1P0CL83 205 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 FDPSP14324 419 aaKnown RBP13.45□□□□□ -0.26
PDGFB-204ENST00000455790 DNAJB1P25685 340 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 NLRP11P59045 1033 aaKnown RBP13.45□□□□□ -0.26
PDGFB-204ENST00000455790 CAMK1Q14012 370 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 DSC3Q14574 896 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 TARBP2Q15633 366 aaKnown RBP13.45□□□□□ -0.26
PDGFB-204ENST00000455790 PIK3AP1Q6ZUJ8 805 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.45□□□□□ -0.26
PDGFB-204ENST00000455790 CEP89Q96ST8 783 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 MAP7D2Q96T17 732 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 NSUN3Q9H649 340 aaKnown RBP13.45□□□□□ -0.26
PDGFB-204ENST00000455790 RGS18Q9NS28 235 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 ORC3Q9UBD5 711 aaPredicted RBP13.45□□□□□ -0.26
PDGFB-204ENST00000455790 SEPT9Q9UHD8 586 aaPredicted RBP13.45□□□□□ -0.26
PDGFB-204ENST00000455790 VAV3Q9UKW4 847 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 RWDD3Q9Y3V2 267 aa13.45□□□□□ -0.26
PDGFB-204ENST00000455790 CCDC194A0A1B0GVG4 234 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 GPR182O15218 404 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 MMP1P03956 469 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 ITGB1P05556 798 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 FGFR1P11362 822 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 FGFR4P22455 802 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 GTF2F1P35269 517 aaKnown RBP eCLIP13.44□□□□□ -0.26
PDGFB-204ENST00000455790 GPC3P51654 580 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 FOSBP53539 338 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 TBC1D8BQ0IIM8 1120 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 ST3GAL1Q11201 340 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 NR5A1Q13285 461 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 COL19A1Q14993 1142 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 LEXMQ3ZCV2 418 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 MTERF2Q49AM1 385 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 FAM102BQ5T8I3 360 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 NEK8Q86SG6 692 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 RDM1Q8NG50 284 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 GTF3C6Q969F1 213 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 KCNMB3Q9NPA1 279 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 CD320Q9NPF0 282 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 NRBP2Q9NSY0 501 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 LRFN2Q9ULH4 789 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 PLAGL2Q9UPG8 496 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 PCDHGC5Q9Y5F6 944 aa13.44□□□□□ -0.26
PDGFB-204ENST00000455790 C5orf42Q9H799 3197 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 TBKBP1A7MCY6 615 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 JAK2O60674 1132 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 CSDE1O75534 798 aaKnown RBP13.43□□□□□ -0.26
PDGFB-204ENST00000455790 IL9P15248 144 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 IRS1P35568 1242 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 HYAL1Q12794 435 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 ANKRD1Q15327 319 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 XKR3Q5GH77 459 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 PLA2G4FQ68DD2 849 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 EP400NLQ6ZTU2 488 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 SLC24A5Q71RS6 500 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 POTEDQ86YR6 584 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 KLHL23Q8NBE8 558 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 NSUN7Q8NE18 718 aaKnown RBP13.43□□□□□ -0.26
PDGFB-204ENST00000455790 NEK9Q8TD19 979 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 HAS1Q92839 578 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 KHSRPQ92945 711 aaKnown RBP eCLIP13.43□□□□□ -0.26
PDGFB-204ENST00000455790 TNFRSF25Q93038 417 aa13.43□□□□□ -0.26
PDGFB-204ENST00000455790 PLVAPQ9BX97 442 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms