RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 KDM3AQ9Y4C1 1321 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 VWA3AA6NCI4 1184 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 PP2D1A8MPX8 630 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 GAS2O43903 313 aaKnown RBP7.89□□□□□ -1.15
COMMD1-205ENST00000455659 USO1O60763 962 aaKnown RBP7.89□□□□□ -1.15
COMMD1-205ENST00000455659 EFCAB14O75071 495 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 MED24O75448 989 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 STBD1O95210 358 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 ATP2A2P16615 1042 aaKnown RBP7.89□□□□□ -1.15
COMMD1-205ENST00000455659 DNAJB2P25686 324 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 CCT6AP40227 531 aaKnown RBP7.89□□□□□ -1.15
COMMD1-205ENST00000455659 RFC5P40937 340 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 NPEPPSP55786 919 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 WDR5P61964 334 aaKnown RBP7.89□□□□□ -1.15
COMMD1-205ENST00000455659 SMAD3P84022 425 aaKnown RBP7.89□□□□□ -1.15
COMMD1-205ENST00000455659 DRP2Q13474 957 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 LPIN1Q14693 890 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 GPNMBQ14956 572 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 KIZQ2M2Z5 673 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 TCTN1Q2MV58 587 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 PLEKHG4Q58EX7 1191 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 XKR9Q5GH70 373 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 FBXO47Q5MNV8 452 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 RASIP1Q5U651 963 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 FOXD4L5Q5VV16 416 aaPredicted RBP7.89□□□□□ -1.15
COMMD1-205ENST00000455659 EFCAB12Q6NXP0 572 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 DTHD1Q6ZMT9 781 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 KIAA0319LQ8IZA0 1049 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 LINC01465Q8N7H1 131 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 DBF4BQ8NFT6 615 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 NLRP7Q8WX94 980 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 FOXD4L4Q8WXT5 416 aaPredicted RBP7.89□□□□□ -1.15
COMMD1-205ENST00000455659 APBB2Q92870 758 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 MTRQ99707 1265 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 CELF4Q9BZC1 486 aaKnown RBP7.89□□□□□ -1.15
COMMD1-205ENST00000455659 SUGCTQ9HAC7 445 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 ATP6V0A4Q9HBG4 840 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 LRWD1Q9UFC0 647 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 REV3LO60673 3130 aa7.89□□□□□ -1.15
COMMD1-205ENST00000455659 FNDC1Q4ZHG4 1894 aaPredicted RBP7.88□□□□□ -1.15
COMMD1-205ENST00000455659 ABHD14A-ACY1A0A1B0GW23 586 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 ARHGEF35A5YM69 484 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 SLITRK3O94933 977 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 LYPLA2O95372 231 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 RPA1P27694 616 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 CD52P31358 61 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 RARRES1P49788 294 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 DNM2P50570 870 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 GPC3P51654 580 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 DEFB103AP81534 67 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 PKP1Q13835 747 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 IKBKEQ14164 716 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 SF3A1Q15459 793 aaKnown RBP7.88□□□□□ -1.15
COMMD1-205ENST00000455659 ZRSR1Q15695 479 aaKnown RBP7.88□□□□□ -1.15
COMMD1-205ENST00000455659 RAB30Q15771 203 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 ZNF697Q5TEC3 545 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 KRT79Q5XKE5 535 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 ARL6IP4Q66PJ3 421 aaKnown RBP7.88□□□□□ -1.15
COMMD1-205ENST00000455659 FAM173BQ6P4H8 233 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 OTUD6AQ7L8S5 288 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 MYOCDQ8IZQ8 938 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 NME8Q8N427 588 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 C4orf32Q8N8J7 132 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 IGSF22Q8N9C0 903 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 RASSF8Q8NHQ8 419 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 PIGOQ8TEQ8 1089 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 TMEM40Q8WWA1 233 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 PSPC1Q8WXF1 523 aaKnown RBP7.88□□□□□ -1.15
COMMD1-205ENST00000455659 ZNF668Q96K58 619 aaPredicted RBP7.88□□□□□ -1.15
COMMD1-205ENST00000455659 NLRP4Q96MN2 994 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 CEP89Q96ST8 783 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 HSD17B14Q9BPX1 270 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 POLR3CQ9BUI4 534 aaPredicted RBP7.88□□□□□ -1.15
COMMD1-205ENST00000455659 OSBPL7Q9BZF2 842 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 ZSCAN16Q9H4T2 348 aaPredicted RBP7.88□□□□□ -1.15
COMMD1-205ENST00000455659 DHX33Q9H6R0 707 aaKnown RBP7.88□□□□□ -1.15
COMMD1-205ENST00000455659 AGO3Q9H9G7 860 aaKnown RBP7.88□□□□□ -1.15
COMMD1-205ENST00000455659 STK24Q9Y6E0 443 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 UNC80Q8N2C7 3258 aa7.88□□□□□ -1.15
COMMD1-205ENST00000455659 IGKV6-21A0A0C4DH24 114 aa7.87□□□□□ -1.15
COMMD1-205ENST00000455659 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.87□□□□□ -1.15
COMMD1-205ENST00000455659 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.87□□□□□ -1.15
COMMD1-205ENST00000455659 GRXCR1A8MXD5 290 aa7.87□□□□□ -1.15
COMMD1-205ENST00000455659 GPR32O75388 356 aa7.87□□□□□ -1.15
COMMD1-205ENST00000455659 MAFO75444 373 aaPredicted RBP7.87□□□□□ -1.15
COMMD1-205ENST00000455659 RPS6KA5O75582 802 aa7.87□□□□□ -1.15
COMMD1-205ENST00000455659 DGAT1O75907 488 aa7.87□□□□□ -1.15
COMMD1-205ENST00000455659 F13A1P00488 732 aa7.87□□□□□ -1.15
COMMD1-205ENST00000455659 AMHP03971 560 aa7.87□□□□□ -1.15
COMMD1-205ENST00000455659 SPATA31C1P0DKV0 1188 aa7.87□□□□□ -1.15
COMMD1-205ENST00000455659 ZSCAN22P10073 491 aaPredicted RBP7.87□□□□□ -1.15
COMMD1-205ENST00000455659 MUTP22033 750 aa7.87□□□□□ -1.15
COMMD1-205ENST00000455659 CRYBB1P53674 252 aaPredicted RBP7.87□□□□□ -1.15
COMMD1-205ENST00000455659 NLRP11P59045 1033 aaKnown RBP7.87□□□□□ -1.15
COMMD1-205ENST00000455659 CEBPZQ03701 1054 aaKnown RBP7.87□□□□□ -1.15
COMMD1-205ENST00000455659 MKRN4PQ13434 485 aaPredicted RBP7.87□□□□□ -1.15
COMMD1-205ENST00000455659 IL17AQ16552 155 aa7.87□□□□□ -1.15
COMMD1-205ENST00000455659 TMCO2Q7Z6W1 182 aaPredicted RBP7.87□□□□□ -1.15
COMMD1-205ENST00000455659 ZNF410Q86VK4 478 aa7.87□□□□□ -1.15
COMMD1-205ENST00000455659 FAM228AQ86W67 206 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms