RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 TUBB2AQ13885 445 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 SLFN12Q8IYM2 578 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 PRPF38AQ8NAV1 312 aaKnown RBP12.14□□□□□ -0.47
DDR1-240ENST00000454612 SPATA20Q8TB22 786 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 EXOC4Q96A65 974 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 TUBB2BQ9BVA1 445 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 PLCB1Q9NQ66 1216 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 TBK1Q9UHD2 729 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 ECM29Q5VYK3 1845 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 A0A1W2PQC6 194 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 DAPK3O43293 454 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 E2F5Q15329 346 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 PASD1Q8IV76 773 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 FMNL3Q8IVF7 1028 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 MICAL1Q8TDZ2 1067 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 GGT7Q9UJ14 662 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 NOVA2Q9UNW9 492 aaKnown RBP12.14□□□□□ -0.47
DDR1-240ENST00000454612 UTP11Q9Y3A2 253 aaKnown RBP12.14□□□□□ -0.47
DDR1-240ENST00000454612 TAF1P21675 1872 aa12.14□□□□□ -0.47
DDR1-240ENST00000454612 LRP5O75197 1615 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 RGL2O15211 777 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 IFNB1P01574 187 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 MYZAPP0CAP1 466 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 DRAP1Q14919 205 aaPredicted RBP12.13□□□□□ -0.47
DDR1-240ENST00000454612 KNOP1Q1ED39 458 aaKnown RBP12.13□□□□□ -0.47
DDR1-240ENST00000454612 CCDC125Q86Z20 511 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 LMBR1Q8WVP7 490 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 CCDC17Q96LX7 622 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 TRIM51Q9BSJ1 452 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 HEMGNQ9BXL5 484 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 PDGFDQ9GZP0 370 aaPredicted RBP12.13□□□□□ -0.47
DDR1-240ENST00000454612 ANKFY1Q9P2R3 1169 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 CYP11B2P19099 503 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 NPEPPSP55786 919 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 CCDC38Q502W7 563 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 CCNI2Q6ZMN8 369 aaPredicted RBP12.13□□□□□ -0.47
DDR1-240ENST00000454612 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.13□□□□□ -0.47
DDR1-240ENST00000454612 CYFIP1Q7L576 1253 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 SLC30A5Q8TAD4 765 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 GPRC5CQ9NQ84 441 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 FAM184BQ9ULE4 1060 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 LY75O60449 1722 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 ANKRD36CQ5JPF3 1778 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 PVALEFA0A1B0GWK0 134 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 ZNF263O14978 683 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 PPFIA1Q13136 1202 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 CC2D2BQ6DHV5 1058 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 MAGOHBQ96A72 148 aaKnown RBP12.13□□□□□ -0.47
DDR1-240ENST00000454612 PURBQ96QR8 312 aaKnown RBP12.13□□□□□ -0.47
DDR1-240ENST00000454612 EHMT1Q9H9B1 1298 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 PARVGQ9HBI0 331 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 ODF2LQ9ULJ1 636 aa12.13□□□□□ -0.47
DDR1-240ENST00000454612 PPP4CP60510 307 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 ELOA2Q8IYF1 753 aaPredicted RBP12.12□□□□□ -0.47
DDR1-240ENST00000454612 SCFD1Q8WVM8 642 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 BTBD6Q96KE9 485 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 FNBP1Q96RU3 617 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 YY1AP1Q9H869 796 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 SALL4Q9UJQ4 1053 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 PLAAQ9Y263 795 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 A0A087WUV0 522 aaPredicted RBP12.12□□□□□ -0.47
DDR1-240ENST00000454612 PPP1R11O60927 126 aaPredicted RBP12.12□□□□□ -0.47
DDR1-240ENST00000454612 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 UCHL3P15374 230 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 SHMT1P34896 483 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 MYL7Q01449 175 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 SEPT7Q16181 437 aaKnown RBP12.12□□□□□ -0.47
DDR1-240ENST00000454612 FAM153CQ494X1 144 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 TRAPPC11Q7Z392 1133 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 EFCAB13Q8IY85 973 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 CCDC26Q8TAB7 109 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 POMGNT1Q8WZA1 660 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 OSGEPQ9NPF4 335 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 SWAP70Q9UH65 585 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 FAM153AQ9UHL3 310 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 PLAGL2Q9UPG8 496 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 CD2APQ9Y5K6 639 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 GLI1P08151 1106 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 KCNJ1P48048 391 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 UAP1Q16222 522 aaPredicted RBP12.12□□□□□ -0.47
DDR1-240ENST00000454612 TADA2BQ86TJ2 420 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 HAUS1Q96CS2 278 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 RSRC1Q96IZ7 334 aaKnown RBP12.12□□□□□ -0.47
DDR1-240ENST00000454612 DNAJC7Q99615 494 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 PRR12Q9ULL5 1215 aa12.12□□□□□ -0.47
DDR1-240ENST00000454612 FAM86B1E9PN63 330 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 AKAP3O75969 853 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 FAM86B2P0C5J1 330 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 TMOD1P28289 359 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 PSMC2P35998 433 aaKnown RBP12.11□□□□□ -0.47
DDR1-240ENST00000454612 PRPHP41219 470 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 ZKSCAN8Q15776 578 aaPredicted RBP12.11□□□□□ -0.47
DDR1-240ENST00000454612 PLA2G4FQ68DD2 849 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 HAS1Q92839 578 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 PAGR1Q9BTK6 254 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 UBXN6Q9BZV1 441 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 MED4Q9NPJ6 270 aa12.11□□□□□ -0.47
DDR1-240ENST00000454612 HPCAL4Q9UM19 191 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 128.5 ms