RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 CASP1P29466 404 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 RTP1P59025 263 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 TLE2Q04725 743 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 RAD51AP2Q09MP3 1159 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 TBC1D8BQ0IIM8 1120 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 SNX17Q15036 470 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 PLCD3Q8N3E9 789 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 METTL13Q8N6R0 699 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 SYT2Q8N9I0 419 aaPredicted RBP13.2□□□□□ -0.3
RCL1-208ENST00000448872 IQUBQ8NA54 791 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 LARP4BQ92615 738 aaKnown RBP13.2□□□□□ -0.3
RCL1-208ENST00000448872 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 CCDC43Q96MW1 224 aaKnown RBP13.2□□□□□ -0.3
RCL1-208ENST00000448872 SUGCTQ9HAC7 445 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 GPRC5CQ9NQ84 441 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 XPNPEP1Q9NQW7 623 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 STK17AQ9UEE5 414 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 ATP11BQ9Y2G3 1177 aa13.2□□□□□ -0.3
RCL1-208ENST00000448872 COL1A2P08123 1366 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 MYH15Q9Y2K3 1946 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 RRN3P2A6NIE6 340 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 MAFO75444 373 aaPredicted RBP13.19□□□□□ -0.3
RCL1-208ENST00000448872 ZNF202O95125 648 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 CAPN2P17655 700 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 CYP11B2P19099 503 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 CLCN3P51790 818 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 POLGP54098 1239 aaPredicted RBP13.19□□□□□ -0.3
RCL1-208ENST00000448872 FAM160A1Q05DH4 1040 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 PTPN11Q06124 597 aaPredicted RBP13.19□□□□□ -0.3
RCL1-208ENST00000448872 EMC2Q15006 297 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 RINT1Q6NUQ1 792 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 GPBP1Q86WP2 473 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 GPT2Q8TD30 523 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 DHX38Q92620 1227 aaKnown RBP13.19□□□□□ -0.3
RCL1-208ENST00000448872 FAM49AQ9H0Q0 323 aaPredicted RBP13.19□□□□□ -0.3
RCL1-208ENST00000448872 DHX33Q9H6R0 707 aaKnown RBP13.19□□□□□ -0.3
RCL1-208ENST00000448872 PDLIM7Q9NR12 457 aa13.19□□□□□ -0.3
RCL1-208ENST00000448872 IGKV6-21A0A0C4DH24 114 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 MYMKA6NI61 221 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 GOLGA6L22H0YM25 854 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 CD4P01730 458 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 SLFN14P0C7P3 912 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 GNAT1P11488 350 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 AFMP43652 599 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 FAAP100Q0VG06 881 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 C1orf53Q5VUE5 145 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 EFCAB12Q6NXP0 572 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 ANKRD33Q7Z3H0 272 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 SERINC5Q86VE9 423 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 KIAA0319LQ8IZA0 1049 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 LINC01465Q8N7H1 131 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 DNAJB3Q8WWF6 145 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 SLC7A3Q8WY07 619 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 PAGE5Q96GU1 130 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 ZNF668Q96K58 619 aaPredicted RBP13.18□□□□□ -0.3
RCL1-208ENST00000448872 PPP1R16BQ96T49 567 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 BLZF1Q9H2G9 400 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 DACT1Q9NYF0 836 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 NOD1Q9Y239 953 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 PCDHA2Q9Y5H9 948 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 FRMPD3Q5JV73 1810 aa13.18□□□□□ -0.3
RCL1-208ENST00000448872 RSPH10B2B2RC85 870 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 DGAT1O75907 488 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 RSPH10BP0C881 870 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 RFC5P40937 340 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 TMEM62Q0P6H9 643 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 FAM102BQ5T8I3 360 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 KRBA2Q6ZNG9 492 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 SV2BQ7L1I2 683 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 DYMQ7RTS9 669 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 SH3RF1Q7Z6J0 888 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 CEP57L1Q8IYX8 460 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 DAW1Q8N136 415 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 KCTD17Q8N5Z5 321 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 ATP6V0A4Q9HBG4 840 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 KBTBD4Q9NVX7 518 aa13.17□□□□□ -0.3
RCL1-208ENST00000448872 SFI1A8K8P3 1242 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 MAGEB2O15479 319 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 HIP1RO75146 1068 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 VTNP04004 478 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 MAPK7Q13164 816 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 TRIM71Q2Q1W2 868 aaKnown RBP13.16□□□□□ -0.3
RCL1-208ENST00000448872 KSR1Q8IVT5 923 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 CNNM3Q8NE01 707 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 ASAP3Q8TDY4 903 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 BSNDQ8WZ55 320 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 DDX12PQ92771 950 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 ERCC4Q92889 916 aaPredicted RBP13.16□□□□□ -0.3
RCL1-208ENST00000448872 REEP2Q9BRK0 252 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 CUEDC2Q9H467 287 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 SUCLA2Q9P2R7 463 aaPredicted RBP13.16□□□□□ -0.3
RCL1-208ENST00000448872 UMODL1Q5DID0 1318 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 SMIM35A0A1B0GVV1 85 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 DCDC2CA8MYV0 355 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 CTSHP09668 335 aa13.16□□□□□ -0.3
RCL1-208ENST00000448872 GUCY2CP25092 1073 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms