RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 LRMDAQ9H2I8 198 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 CNNM1Q9NRU3 951 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 NMRK1Q9NWW6 199 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 NR2E1Q9Y466 385 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 AKAP11Q9UKA4 1901 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 CALM1P0DP23 149 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 CALM2P0DP24 149 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 CALM3P0DP25 149 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 VEGFAP15692 232 aaPredicted RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 FGFR4P22455 802 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 TARSP26639 723 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 CALML3P27482 149 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 LTKP29376 864 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 COPB2P35606 906 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 MGAT5Q09328 741 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 MYBPC3Q14896 1274 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 BARGINQ6ZT62 677 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 ZC3H18Q86VM9 953 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 ECHDC2Q86YB7 292 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 CCNJLQ8IV13 435 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 SRBD1Q8N5C6 995 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 MIPOL1Q8TD10 442 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 LRRC8CQ8TDW0 803 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 ARHGEF2Q92974 986 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 ZNF333Q96JL9 665 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 TGS1Q96RS0 853 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 TSG101Q99816 390 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 OCEL1Q9H607 264 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 GALNT8Q9NY28 637 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 ATXN10Q9UBB4 475 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 MTRF1LQ9UGC7 380 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 PHF24Q9UPV7 400 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 PCDHGA4Q9Y5G9 962 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 PKD1L3Q7Z443 1732 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 PNPLA7Q6ZV29 1317 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 CNTNAP5Q8WYK1 1306 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 SMAPO00193 183 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 ATP9AO75110 1047 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 ENTPD5O75356 428 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 GNAT2P19087 354 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 VHLP40337 213 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 PSMC4P43686 418 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 MYLK4Q86YV6 388 aaPredicted RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 ZNF512BQ96KM6 892 aaPredicted RBP10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 DCLRE1BQ9H816 532 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 BLOC1S6Q9UL45 172 aa10.18□□□□□ -0.78
SYNPO2-204ENST00000448416 NBPF26B4DH59 902 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 ECEL1O95672 775 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 STX2P32856 288 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 LRRC63Q05C16 580 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 TROAPQ12815 778 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 KIAA1755Q5JYT7 1200 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 WASHC2DQ5SRD0 308 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 UBAP2Q5T6F2 1119 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 NBPF15Q8N660 670 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 CKAP2Q8WWK9 683 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 ERP27Q96DN0 273 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 TBC1D10AQ9BXI6 508 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 MYLK2Q9H1R3 596 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 PREBQ9HCU5 417 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 SUCLA2Q9P2R7 463 aaPredicted RBP10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 UQCRFS1P1P0C7P4 283 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 PTENP60484 403 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 ZRSR2Q15696 482 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 TXNRD1Q16881 649 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 SESTD1Q86VW0 696 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 FBXO41Q8TF61 875 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 RAPGEF4Q8WZA2 1011 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 TMEM165Q9HC07 324 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 RASAL2Q9UJF2 1139 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 RPTORQ8N122 1335 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 LMNAP02545 664 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 CREB1P16220 341 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 IGHMBP2P38935 993 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 PTK2Q05397 1052 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 CCDC15Q0P6D6 951 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 ALKBH5Q6P6C2 394 aaKnown RBP10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 SYCE1Q8N0S2 351 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 MIGA1Q8NAN2 632 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 TTLL11Q8NHH1 800 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 TMEM109Q9BVC6 243 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 FAM192AQ9GZU8 254 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 AIPL1Q9NZN9 384 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 AMFRQ9UKV5 643 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 FAM205AQ6ZU69 1335 aa10.17□□□□□ -0.78
SYNPO2-204ENST00000448416 MAGEA13PA6NCF6 341 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 ZBTB48P10074 688 aaPredicted RBP10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 KRT13P13646 458 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 EPHB2P29323 1055 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 MKRN3Q13064 507 aaKnown RBP10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 MTA1Q13330 715 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 PPP2R5EQ16537 467 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 INF2Q27J81 1249 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 COBLL1Q53SF7 1204 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 ZNF449Q6P9G9 518 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 DYMQ7RTS9 669 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 LCA5Q86VQ0 697 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 GUF1Q8N442 669 aaKnown RBP10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 ANKLE1Q8NAG6 615 aa10.16□□□□□ -0.78
SYNPO2-204ENST00000448416 FAM187AA6NFU0 413 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms