RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 NSUN6Q8TEA1 469 aaKnown RBP4.57□□□□□ -1.68
PMS1-216ENST00000447734 RTF1Q92541 710 aaKnown RBP4.57□□□□□ -1.68
PMS1-216ENST00000447734 EAF2Q96CJ1 260 aaPredicted RBP4.57□□□□□ -1.68
PMS1-216ENST00000447734 ERP27Q96DN0 273 aa4.57□□□□□ -1.68
PMS1-216ENST00000447734 LTV1Q96GA3 475 aaPredicted RBP4.57□□□□□ -1.68
PMS1-216ENST00000447734 ZNF496Q96IT1 587 aaPredicted RBP4.57□□□□□ -1.68
PMS1-216ENST00000447734 CGRRF1Q99675 332 aa4.57□□□□□ -1.68
PMS1-216ENST00000447734 LRFN3Q9BTN0 628 aa4.57□□□□□ -1.68
PMS1-216ENST00000447734 JAM3Q9BX67 310 aa4.57□□□□□ -1.68
PMS1-216ENST00000447734 ANO3Q9BYT9 981 aa4.57□□□□□ -1.68
PMS1-216ENST00000447734 CLIC5Q9NZA1 410 aa4.57□□□□□ -1.68
PMS1-216ENST00000447734 FBXL7Q9UJT9 491 aa4.57□□□□□ -1.68
PMS1-216ENST00000447734 USP21Q9UK80 565 aa4.57□□□□□ -1.68
PMS1-216ENST00000447734 TIMM13Q9Y5L4 95 aaPredicted RBP4.57□□□□□ -1.68
PMS1-216ENST00000447734 SNX13Q9Y5W8 968 aa4.57□□□□□ -1.68
PMS1-216ENST00000447734 A0A1B0GVC2 190 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 SHISA3A0PJX4 238 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 hCG_1984214I3L0E3 225 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 NCAM2O15394 837 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 NCK2O43639 380 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 CLEC2LP0C7M8 214 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 BCL6P41182 706 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 TECP42680 631 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 IL12RB1P42701 662 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 AGFG1P52594 562 aaKnown RBP4.56□□□□□ -1.68
PMS1-216ENST00000447734 MANFP55145 182 aaKnown RBP4.56□□□□□ -1.68
PMS1-216ENST00000447734 MRPS9P82933 396 aaKnown RBP4.56□□□□□ -1.68
PMS1-216ENST00000447734 LAPTM5Q13571 262 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 HSF5Q4G112 596 aaPredicted RBP4.56□□□□□ -1.68
PMS1-216ENST00000447734 FAM209BQ5JX69 171 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 CPZQ66K79 652 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 SWSAP1Q6NVH7 229 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 CC2D1AQ6P1N0 951 aaPredicted RBP4.56□□□□□ -1.68
PMS1-216ENST00000447734 PGBD2Q6P3X8 592 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 CFAP161Q6P656 301 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 CCDC62Q6P9F0 684 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 SYDE1Q6ZW31 735 aaPredicted RBP4.56□□□□□ -1.68
PMS1-216ENST00000447734 MAEAQ7L5Y9 396 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 KCNK18Q7Z418 384 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 CPNE8Q86YQ8 564 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 WFDC12Q8WWY7 111 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 AUTS2Q8WXX7 1259 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 PHKBQ93100 1093 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 ARL8AQ96BM9 186 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 RAX2Q96IS3 184 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 Q96M66 194 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 KRTAP4-9Q9BYQ8 210 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 BTBD1Q9H0C5 482 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 ACSS3Q9H6R3 686 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 LGR6Q9HBX8 967 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 STARD7Q9NQZ5 370 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 RASSF1Q9NS23 344 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 SMC4Q9NTJ3 1288 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 TPCN1Q9ULQ1 816 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 PADI4Q9UM07 663 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 MAGED2Q9UNF1 606 aaPredicted RBP4.56□□□□□ -1.68
PMS1-216ENST00000447734 STXBP5LQ9Y2K9 1186 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 PCDHGB2Q9Y5G2 931 aa4.56□□□□□ -1.68
PMS1-216ENST00000447734 H7BY64 318 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 RBAK-RBAKDNI3L0D1 243 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 ADAMTS3O15072 1205 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 MBD4O95243 580 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 MED26O95402 600 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 CBX7O95931 251 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 EOMESO95936 686 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 PYGLP06737 847 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 TMEM253P0C7T8 217 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 MCCP23508 829 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 SMARCA1P28370 1054 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 KIR3DL1P43629 444 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 STT3AP46977 705 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 USP11P51784 963 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 BCAR1P56945 870 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 RAC1P63000 192 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 STARD3Q14849 445 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 TMEM132BQ14DG7 1078 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 FIGNQ5HY92 759 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 SFRP5Q5T4F7 317 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 INTS11Q5TA45 600 aaKnown RBP4.55□□□□□ -1.68
PMS1-216ENST00000447734 ANKRD34AQ69YU3 496 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 TTLL5Q6EMB2 1281 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 MZT2BQ6NZ67 158 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 C1orf122Q6ZSJ8 110 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 ESPNLQ6ZVH7 1005 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 PDZD4Q76G19 769 aaPredicted RBP4.55□□□□□ -1.68
PMS1-216ENST00000447734 TOP6BLQ8N6T0 577 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 MARCH10Q8NA82 808 aaPredicted RBP4.55□□□□□ -1.68
PMS1-216ENST00000447734 GIMAP8Q8ND71 665 aaPredicted RBP4.55□□□□□ -1.68
PMS1-216ENST00000447734 TBC1D20Q96BZ9 403 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 TCTN2Q96GX1 697 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 LRRC27Q9C0I9 530 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 CDIP1Q9H305 208 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 KIAA1586Q9HCI6 787 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 DCP1AQ9NPI6 582 aaPredicted RBP4.55□□□□□ -1.68
PMS1-216ENST00000447734 KMT5AQ9NQR1 393 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 PRDM5Q9NQX1 630 aaPredicted RBP4.55□□□□□ -1.68
PMS1-216ENST00000447734 BTG4Q9NY30 223 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 PDP2Q9P2J9 529 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 B3GALT1Q9Y5Z6 326 aa4.55□□□□□ -1.68
PMS1-216ENST00000447734 SSU72P8A0A1W2PR75 194 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms