RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 SCN4BQ8IWT1 228 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 MICALL2Q8IY33 904 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 GSDMBQ8TAX9 411 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 AGR3Q8TD06 166 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 PPP1R36Q96LQ0 422 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 ZCWPW1Q9H0M4 648 aa8.62□□□□□ -1.03
RIF1-205ENST00000444746 ZSCAN20P17040 1043 aaPredicted RBP8.61□□□□□ -1.03
RIF1-205ENST00000444746 CPSF1Q10570 1443 aaKnown RBP8.61□□□□□ -1.03
RIF1-205ENST00000444746 C2CD6Q53TS8 623 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 C3orf67Q6ZVT6 689 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 LDHDQ86WU2 507 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 TMEM39BQ9GZU3 492 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 FAM217BQ9NTX9 383 aaPredicted RBP8.61□□□□□ -1.03
RIF1-205ENST00000444746 BARHL2Q9NY43 387 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 SLC5A4Q9NY91 659 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 SMIM22K7EJ46 135 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 CYP26A1O43174 497 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 CPP00450 1065 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 ACOT2P49753 483 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 TUBB4BP68371 445 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 DRAP1Q14919 205 aaPredicted RBP8.61□□□□□ -1.03
RIF1-205ENST00000444746 C12orf60Q5U649 245 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 TXNRD3Q86VQ6 643 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 AGPAT5Q9NUQ2 364 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 TUBBP07437 444 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 PCP11498 1178 aaKnown RBP8.61□□□□□ -1.03
RIF1-205ENST00000444746 SERPINB6P35237 376 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 AGBL1Q96MI9 1066 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 TMEM206Q9H813 350 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 ZNF568Q3ZCX4 644 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 IGDCC4Q8TDY8 1250 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 IFT122Q9HBG6 1241 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 RFX1P22670 979 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 PHBP35232 272 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 ARHGEF18Q6ZSZ5 1173 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 PDCD6IPQ8WUM4 868 aaKnown RBP8.61□□□□□ -1.03
RIF1-205ENST00000444746 ELAC2Q9BQ52 826 aaKnown RBP8.61□□□□□ -1.03
RIF1-205ENST00000444746 LRRC4Q9HBW1 653 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 ZNF302Q9NR11 478 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.61□□□□□ -1.03
RIF1-205ENST00000444746 M0QYV0 167 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 RGS7P49802 495 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 NSUN2Q08J23 767 aaKnown RBP eCLIP8.61□□□□□ -1.03
RIF1-205ENST00000444746 PDE1CQ14123 709 aaPredicted RBP8.61□□□□□ -1.03
RIF1-205ENST00000444746 DCAF4Q8WV16 495 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 CPA5Q8WXQ8 436 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 RABGGTAQ92696 567 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 FAF2Q96CS3 445 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 CUEDC2Q9H467 287 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 TTC36A6NLP5 189 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 PRPSAP2O60256 369 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 LCP1P13796 627 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 GCFC2P16383 781 aaKnown RBP8.61□□□□□ -1.03
RIF1-205ENST00000444746 GGCXP38435 758 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 SLMAPQ14BN4 828 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 MUM1Q2TAK8 710 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 ANKMY2Q8IV38 441 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 HACE1Q8IYU2 909 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 RTKN2Q8IZC4 609 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 LRRC71Q8N4P6 559 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 MICAL1Q8TDZ2 1067 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 CLASP1Q7Z460 1538 aa8.61□□□□□ -1.03
RIF1-205ENST00000444746 ZNF233A6NK53 670 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 NCF2P19878 526 aaPredicted RBP8.6□□□□□ -1.03
RIF1-205ENST00000444746 POLR2BP30876 1174 aaKnown RBP8.6□□□□□ -1.03
RIF1-205ENST00000444746 MSH2P43246 934 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 IREB2P48200 963 aaKnown RBP8.6□□□□□ -1.03
RIF1-205ENST00000444746 SIX6OS1Q8N1H7 587 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 FAM71BQ8TC56 605 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 PI4K2AQ9BTU6 479 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 PSMD14O00487 310 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 CTNND1O60716 968 aaKnown RBP8.6□□□□□ -1.03
RIF1-205ENST00000444746 MDH1BQ5I0G3 518 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 OR2W6PQ8NHA6 318 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 TTC17Q96AE7 1141 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 PPME1Q9Y570 386 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 FLT1P17948 1338 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 NRKQ7Z2Y5 1582 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 CLEC4GQ6UXB4 293 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 DEFB132Q7Z7B7 95 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 FAM160B2Q86V87 743 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 DEPDC1BQ8WUY9 529 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 P3H4Q92791 437 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 PHLPP2Q6ZVD8 1323 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 TULP4Q9NRJ4 1543 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 LGALS16A8MUM7 142 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 PPFIA4O75335 1185 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 FTLP02792 175 aaPredicted RBP8.6□□□□□ -1.03
RIF1-205ENST00000444746 BAATQ14032 418 aaPredicted RBP8.6□□□□□ -1.03
RIF1-205ENST00000444746 STXBP2Q15833 593 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 EZH2Q15910 746 aaKnown RBP8.6□□□□□ -1.03
RIF1-205ENST00000444746 JADE1Q6IE81 842 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 SOX11P35716 441 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 NLRP11P59045 1033 aaKnown RBP8.6□□□□□ -1.03
RIF1-205ENST00000444746 ADGRA1Q86SQ6 560 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 KCNV2Q8TDN2 545 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 PARD3BQ8TEW8 1205 aa8.6□□□□□ -1.03
RIF1-205ENST00000444746 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.6□□□□□ -1.032e-6■■□□□ 13.3
RIF1-205ENST00000444746 RIN2Q8WYP3 895 aaPredicted RBP8.6□□□□□ -1.03
RIF1-205ENST00000444746 MTRQ99707 1265 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms