RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 TRMT1LQ7Z2T5 733 aaKnown RBP9.25□□□□□ -0.93
TIMP1-203ENST00000441738 KCNK18Q7Z418 384 aa9.25□□□□□ -0.93
TIMP1-203ENST00000441738 TMCO2Q7Z6W1 182 aaPredicted RBP9.25□□□□□ -0.93
TIMP1-203ENST00000441738 DEFB128Q7Z7B8 93 aa9.25□□□□□ -0.93
TIMP1-203ENST00000441738 SLFN12Q8IYM2 578 aa9.25□□□□□ -0.93
TIMP1-203ENST00000441738 TMEM199Q8N511 208 aa9.25□□□□□ -0.93
TIMP1-203ENST00000441738 HERVK_113Q902F9 699 aa9.25□□□□□ -0.93
TIMP1-203ENST00000441738 RNPC3Q96LT9 517 aaKnown RBP9.25□□□□□ -0.93
TIMP1-203ENST00000441738 FAM49AQ9H0Q0 323 aaPredicted RBP9.25□□□□□ -0.93
TIMP1-203ENST00000441738 TSPYL2Q9H2G4 693 aaPredicted RBP9.25□□□□□ -0.93
TIMP1-203ENST00000441738 AGO3Q9H9G7 860 aaKnown RBP9.25□□□□□ -0.93
TIMP1-203ENST00000441738 C11orf16Q9NQ32 467 aa9.25□□□□□ -0.93
TIMP1-203ENST00000441738 PCDHA12Q9UN75 941 aa9.25□□□□□ -0.93
TIMP1-203ENST00000441738 NOD1Q9Y239 953 aa9.25□□□□□ -0.93
TIMP1-203ENST00000441738 SAMM50Q9Y512 469 aa9.25□□□□□ -0.93
TIMP1-203ENST00000441738 CDY2AQ9Y6F7 541 aa9.25□□□□□ -0.93
TIMP1-203ENST00000441738 KDM3AQ9Y4C1 1321 aa9.25□□□□□ -0.93
TIMP1-203ENST00000441738 ANK1P16157 1881 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.24□□□□□ -0.93
TIMP1-203ENST00000441738 FAM86C2PA6NEL3 165 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 RRN3P2A6NIE6 340 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 RSPH10B2B2RC85 870 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 STX6O43752 255 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 CAND2O75155 1236 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 GPR32O75388 356 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 RSPH10BP0C881 870 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 CDC25AP30304 524 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 RFC2P35250 354 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 PBX2P40425 430 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 TECP42680 631 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 QARSP47897 775 aaKnown RBP9.24□□□□□ -0.93
TIMP1-203ENST00000441738 PSMC5P62195 406 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 DEFB103AP81534 67 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 MRPS6P82932 125 aaKnown RBP9.24□□□□□ -0.93
TIMP1-203ENST00000441738 FOXK2Q01167 660 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 BFSP2Q13515 415 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 AAK1Q2M2I8 961 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 PLEKHG4Q58EX7 1191 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 RILPL1Q5EBL4 403 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 XKR3Q5GH77 459 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 FBXO47Q5MNV8 452 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 TAF2Q6P1X5 1199 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 POTEGQ6S5H5 508 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 OTOP2Q7RTS6 562 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 SPRED2Q7Z698 418 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 CATSPER3Q86XQ3 398 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 HSCBQ8IWL3 235 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 C4orf19Q8IY42 314 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 CRIPAKQ8N1N5 446 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 LRRC71Q8N4P6 559 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 SPRYD3Q8NCJ5 442 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 TIFAQ96CG3 184 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 USP28Q96RU2 1077 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 ADAMTS10Q9H324 1103 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 DHX33Q9H6R0 707 aaKnown RBP9.24□□□□□ -0.93
TIMP1-203ENST00000441738 SEPT9Q9UHD8 586 aaPredicted RBP9.24□□□□□ -0.93
TIMP1-203ENST00000441738 KIF3AQ9Y496 699 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 CLIC4Q9Y696 253 aa9.24□□□□□ -0.93
TIMP1-203ENST00000441738 TDRD15B5MCY1 1934 aaKnown RBP9.23□□□□□ -0.93
TIMP1-203ENST00000441738 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.23□□□□□ -0.93
TIMP1-203ENST00000441738 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.23□□□□□ -0.93
TIMP1-203ENST00000441738 H3BQV1 296 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 MAFO75444 373 aaPredicted RBP9.23□□□□□ -0.93
TIMP1-203ENST00000441738 VTNP04004 478 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 P4HBP07237 508 aaKnown RBP9.23□□□□□ -0.93
TIMP1-203ENST00000441738 GHRP10912 638 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 GNAT1P11488 350 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 PRPHP41219 470 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 WDR5P61964 334 aaKnown RBP9.23□□□□□ -0.93
TIMP1-203ENST00000441738 NHLH1Q02575 133 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 MTERF2Q49AM1 385 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 PSRC1Q6PGN9 363 aaPredicted RBP9.23□□□□□ -0.93
TIMP1-203ENST00000441738 USP49Q70CQ1 688 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 BRAPQ7Z569 592 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 RTN4RL1Q86UN2 441 aaPredicted RBP9.23□□□□□ -0.93
TIMP1-203ENST00000441738 DBF4BQ8NFT6 615 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 ZNF668Q96K58 619 aaPredicted RBP9.23□□□□□ -0.93
TIMP1-203ENST00000441738 FAM167AQ96KS9 214 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 PNMA5Q96PV4 448 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 PPP1R16BQ96T49 567 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 TMX1Q9H3N1 280 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 PRDM12Q9H4Q4 367 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 CYP26B1Q9NR63 512 aa9.23□□□□□ -0.93
TIMP1-203ENST00000441738 NOL7Q9UMY1 257 aaKnown RBP9.23□□□□□ -0.93
TIMP1-203ENST00000441738 MGEA5O60502 916 aa9.22□□□□□ -0.93
TIMP1-203ENST00000441738 BAG4O95429 457 aaKnown RBP9.22□□□□□ -0.93
TIMP1-203ENST00000441738 PDCP20941 246 aa9.22□□□□□ -0.93
TIMP1-203ENST00000441738 IGFBP4P22692 258 aa9.22□□□□□ -0.93
TIMP1-203ENST00000441738 RPA1P27694 616 aa9.22□□□□□ -0.93
TIMP1-203ENST00000441738 YWHABP31946 246 aaKnown RBP9.22□□□□□ -0.93
TIMP1-203ENST00000441738 RARRES1P49788 294 aa9.22□□□□□ -0.93
TIMP1-203ENST00000441738 GRB10Q13322 594 aa9.22□□□□□ -0.93
TIMP1-203ENST00000441738 GNL2Q13823 731 aaKnown RBP9.22□□□□□ -0.93
TIMP1-203ENST00000441738 SF3A1Q15459 793 aaKnown RBP9.22□□□□□ -0.93
TIMP1-203ENST00000441738 EFCAB12Q6NXP0 572 aa9.22□□□□□ -0.93
TIMP1-203ENST00000441738 CNKSR3Q6P9H4 555 aa9.22□□□□□ -0.93
TIMP1-203ENST00000441738 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.22□□□□□ -0.93
TIMP1-203ENST00000441738 FAM228AQ86W67 206 aa9.22□□□□□ -0.93
TIMP1-203ENST00000441738 KSR1Q8IVT5 923 aa9.22□□□□□ -0.93
TIMP1-203ENST00000441738 CKAP2LQ8IYA6 745 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms