RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 KRT76Q01546 638 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 PLEKHG4Q58EX7 1191 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 ZNF746Q6NUN9 644 aaPredicted RBP9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 POTEBQ6S5H4 581 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 KRT25Q7Z3Z0 450 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 RPAINQ86UA6 219 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 HERC6Q8IVU3 1022 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 ATP8B4Q8TF62 1192 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 SLC9A7Q96T83 725 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 FAM49AQ9H0Q0 323 aaPredicted RBP9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 MTIF3Q9H2K0 278 aaKnown RBP9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 AZI2Q9H6S1 392 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 ZNF302Q9NR11 478 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 TBC1D22BQ9NU19 505 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 LIMCH1Q9UPQ0 1083 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 STXBP5LQ9Y2K9 1186 aa9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 MAFBQ9Y5Q3 323 aaPredicted RBP9.66□□□□□ -0.86
HERPUD2-206ENST00000438224 UNC80Q8N2C7 3258 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 EPOPA6NHQ4 379 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 DDX11L8A8MPP1 907 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 EML1O00423 815 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 CHMP2AO43633 222 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 GAS7O60861 476 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 CAND2O75155 1236 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 BAIAP3O94812 1187 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 STBD1O95210 358 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 PARNO95453 639 aaKnown RBP9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 CA3P07451 260 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 GHRP10912 638 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 ACTN1P12814 892 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 SOX11P35716 441 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 GUCY1B3Q02153 619 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 TMEM62Q0P6H9 643 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 ADGRE1Q14246 886 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 LPIN1Q14693 890 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 RAB30Q15771 203 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 LETM2Q2VYF4 491 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 LRCH2Q5VUJ6 765 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 KRT40Q6A162 431 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 MIS18BP1Q6P0N0 1132 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 TAF2Q6P1X5 1199 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 PDXDC2PQ6P474 469 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 MTHFD1LQ6UB35 978 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 MOXD1Q6UVY6 613 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 PIK3AP1Q6ZUJ8 805 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 TRMT1LQ7Z2T5 733 aaKnown RBP9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 HAS1Q92839 578 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 UCN2Q96RP3 112 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 RIT2Q99578 217 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 PRDM12Q9H4Q4 367 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 AGO3Q9H9G7 860 aaKnown RBP9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 KCNMB3Q9NPA1 279 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 DISC1Q9NRI5 854 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 GABBR1Q9UBS5 961 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 PCDHA11Q9Y5I1 949 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 PCDHA10Q9Y5I2 948 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 CDY2AQ9Y6F7 541 aa9.65□□□□□ -0.86
HERPUD2-206ENST00000438224 TTC28Q96AY4 2481 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 NCOR1O75376 2440 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 CCDC194A0A1B0GVG4 234 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 ABHD14A-ACY1A0A1B0GW23 586 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 TMEM150BA6NC51 233 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 RRN3P2A6NIE6 340 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 BTBD18B2RXH4 712 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 HBP1O60381 514 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 C22orf31O95567 290 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 MMP1P03956 469 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 PSAPP07602 524 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 KLRC1P26715 233 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 KRT2P35908 639 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 SLC26A2P50443 739 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 MRPS6P82932 125 aaKnown RBP9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 PRKCEQ02156 737 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 TAP1Q03518 808 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 FBXO47Q5MNV8 452 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 FAM160B1Q5W0V3 765 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 NEK8Q86SG6 692 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 SMAP1Q8IYB5 467 aaPredicted RBP9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 DIS3L2Q8IYB7 885 aaKnown RBP9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 LINC01465Q8N7H1 131 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 USP38Q8NB14 1042 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 PHOSPHO2Q8TCD6 241 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 LINC01599Q8WXQ3 324 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 TEKT3Q9BXF9 490 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 TFIP11Q9UBB9 837 aaKnown RBP9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 DDX25Q9UHL0 483 aaKnown RBP9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 MSRAQ9UJ68 235 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 VAV3Q9UKW4 847 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 PCDHGA4Q9Y5G9 962 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 PCDHA2Q9Y5H9 948 aa9.64□□□□□ -0.87
HERPUD2-206ENST00000438224 COL1A2P08123 1366 aa9.63□□□□□ -0.87
HERPUD2-206ENST00000438224 WDR64B1ANS9 1081 aa9.63□□□□□ -0.87
HERPUD2-206ENST00000438224 RFXAPO00287 272 aa9.63□□□□□ -0.87
HERPUD2-206ENST00000438224 GJB5O95377 273 aa9.63□□□□□ -0.87
HERPUD2-206ENST00000438224 XBP1P17861 261 aa9.63□□□□□ -0.87
HERPUD2-206ENST00000438224 KCNJ6P48051 423 aa9.63□□□□□ -0.87
HERPUD2-206ENST00000438224 SPIRE1Q08AE8 756 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms