RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 LCTP09848 1927 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 TTC26A0AVF1 554 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 ASB14A6NK59 587 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 SFI1A8K8P3 1242 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 USO1O60763 962 aaKnown RBP16.9■□□□□ 0.3
SGCE-205ENST00000437425 HOXD13P35453 343 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 PSMC2P35998 433 aaKnown RBP16.9■□□□□ 0.3
SGCE-205ENST00000437425 UGCGQ16739 394 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 SWSAP1Q6NVH7 229 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 DAW1Q8N136 415 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 EEF2KMTQ96G04 330 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 C16orf45Q96MC5 204 aaPredicted RBP16.9■□□□□ 0.3
SGCE-205ENST00000437425 ACCSQ96QU6 501 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 TXNRD2Q9NNW7 524 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 EXOC7Q9UPT5 735 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 SIK3Q9Y2K2 1263 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 KIAA1217Q5T5P2 1943 aa16.9■□□□□ 0.3
SGCE-205ENST00000437425 ASTN1O14525 1302 aa16.89■□□□□ 0.3
SGCE-205ENST00000437425 STRNO43815 780 aa16.89■□□□□ 0.29
SGCE-205ENST00000437425 XRCC5P13010 732 aaKnown RBP16.89■□□□□ 0.29
SGCE-205ENST00000437425 NMT1P30419 496 aaKnown RBP16.89■□□□□ 0.29
SGCE-205ENST00000437425 FAM160B1Q5W0V3 765 aa16.89■□□□□ 0.29
SGCE-205ENST00000437425 ANO5Q75V66 913 aa16.89■□□□□ 0.29
SGCE-205ENST00000437425 C12orf56Q8IXR9 622 aa16.89■□□□□ 0.29
SGCE-205ENST00000437425 SYCP3Q8IZU3 236 aa16.89■□□□□ 0.29
SGCE-205ENST00000437425 SPIRE2Q8WWL2 714 aa16.89■□□□□ 0.29
SGCE-205ENST00000437425 MS4A4AQ96JQ5 239 aa16.89■□□□□ 0.29
SGCE-205ENST00000437425 CEP170P1Q96L14 293 aa16.89■□□□□ 0.29
SGCE-205ENST00000437425 TRMT1Q9NXH9 659 aaKnown RBP16.89■□□□□ 0.29
SGCE-205ENST00000437425 MORF4L1Q9UBU8 362 aa16.89■□□□□ 0.29
SGCE-205ENST00000437425 FRMD4BQ9Y2L6 1034 aa16.89■□□□□ 0.29
SGCE-205ENST00000437425 PPP2R2CQ9Y2T4 447 aa16.89■□□□□ 0.29
SGCE-205ENST00000437425 MAFBQ9Y5Q3 323 aaPredicted RBP16.89■□□□□ 0.29
SGCE-205ENST00000437425 IGKV6D-21A0A0A0MT36 114 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 CCL15-CCL14A0A0B4J2E2 113 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 K7ENM7 598 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 PDHXO00330 501 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 BACH1O14867 736 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 TGFB1I1O43294 461 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 NCKAP1LP55160 1127 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 GTF2BQ00403 316 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 GOLGA8FQ08AF8 430 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 GOLGA8DPQ0D2H9 430 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 DMP1Q13316 513 aaPredicted RBP16.88■□□□□ 0.29
SGCE-205ENST00000437425 HSP90AA2PQ14568 343 aaPredicted RBP16.88■□□□□ 0.29
SGCE-205ENST00000437425 MEA1Q16626 185 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 CCL15Q16663 113 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 METTL7BQ6UX53 244 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 SEPT14Q6ZU15 432 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 EXOC8Q8IYI6 725 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 NEK11Q8NG66 645 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 KIF18AQ8NI77 898 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 RRAGCQ9HB90 399 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 ZNF302Q9NR11 478 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 R3HCC1Q9Y3T6 440 aaKnown RBP16.88■□□□□ 0.29
SGCE-205ENST00000437425 DAAM1Q9Y4D1 1078 aa16.88■□□□□ 0.29
SGCE-205ENST00000437425 GTPBP10A4D1E9 387 aaKnown RBP16.87■□□□□ 0.29
SGCE-205ENST00000437425 AFPP02771 609 aaKnown RBP16.87■□□□□ 0.29
SGCE-205ENST00000437425 HNRNPH3P31942 346 aaKnown RBP16.87■□□□□ 0.29
SGCE-205ENST00000437425 PRKCEQ02156 737 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 PPP2R5AQ15172 486 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 Q3C1V9 767 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 CYFIP1Q7L576 1253 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 CCDC170Q8IYT3 715 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 AFAP1L1Q8TED9 768 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 KCNN1Q92952 543 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 FAM167AQ96KS9 214 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 PARK7Q99497 189 aaKnown RBP16.87■□□□□ 0.29
SGCE-205ENST00000437425 NTPCRQ9BSD7 190 aaKnown RBP16.87■□□□□ 0.29
SGCE-205ENST00000437425 ATP6V0A4Q9HBG4 840 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 CYP26B1Q9NR63 512 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 NRBP2Q9NSY0 501 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 DMAC2Q9NW81 257 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 SYNGAP1Q96PV0 1343 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 ZMYM2Q9UBW7 1377 aa16.87■□□□□ 0.29
SGCE-205ENST00000437425 USP27XA6NNY8 438 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 MAPK13O15264 365 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 ZNF862O60290 1169 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 FARP2O94887 1054 aaPredicted RBP16.86■□□□□ 0.29
SGCE-205ENST00000437425 STBD1O95210 358 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 CELF2O95319 508 aaKnown RBP16.86■□□□□ 0.29
SGCE-205ENST00000437425 POTEJP0CG39 1038 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 UBA1P22314 1058 aaKnown RBP16.86■□□□□ 0.29
SGCE-205ENST00000437425 FAM102BQ5T8I3 360 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 UTP14CQ5TAP6 766 aaKnown RBP16.86■□□□□ 0.29
SGCE-205ENST00000437425 SPRYD7Q5W111 196 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 ZNF467Q7Z7K2 595 aaPredicted RBP16.86■□□□□ 0.29
SGCE-205ENST00000437425 CCDC60Q8IWA6 550 aaPredicted RBP16.86■□□□□ 0.29
SGCE-205ENST00000437425 SEPT1Q8WYJ6 367 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 SYN2Q92777 582 aaPredicted RBP16.86■□□□□ 0.29
SGCE-205ENST00000437425 IFT74Q96LB3 600 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 NIFKQ9BYG3 293 aaKnown RBP16.86■□□□□ 0.29
SGCE-205ENST00000437425 MMRN2Q9H8L6 949 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 ZCCHC17Q9NP64 241 aaKnown RBP16.86■□□□□ 0.29
SGCE-205ENST00000437425 AGPAT3Q9NRZ7 376 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 SEPT9Q9UHD8 586 aaPredicted RBP16.86■□□□□ 0.29
SGCE-205ENST00000437425 MYH11P35749 1972 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 BTBD19C9JJ37 291 aa16.86■□□□□ 0.29
SGCE-205ENST00000437425 IPO7O95373 1038 aaKnown RBP16.86■□□□□ 0.29
SGCE-205ENST00000437425 OATP04181 439 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms