RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 UBE2TQ9NPD8 197 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-203ENST00000434735 OLA1Q9NTK5 396 aaKnown RBP13.11□□□□□ -0.31
UBE3B-203ENST00000434735 FBXO28Q9NVF7 368 aa13.11□□□□□ -0.31
UBE3B-203ENST00000434735 TBKBP1A7MCY6 615 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 MAGEB2O15479 319 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 PRPSAP2O60256 369 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 TMEM132BQ14DG7 1078 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 PSMD6Q15008 389 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 VPS37BQ9H9H4 285 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 TJP2Q9UDY2 1190 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 UTP11Q9Y3A2 253 aaKnown RBP13.1□□□□□ -0.31
UBE3B-203ENST00000434735 USP31Q70CQ4 1352 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 RRN3P2A6NIE6 340 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 WNT10BO00744 389 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 DYNLT1P63172 113 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 EFCAB12Q6NXP0 572 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 C12orf60Q5U649 245 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 EMILIN3Q9NT22 766 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 EIF4E1BA6NMX2 242 aaKnown RBP13.1□□□□□ -0.31
UBE3B-203ENST00000434735 GPR182O15218 404 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 HOXA2O43364 376 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 AKR1A1P14550 325 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 KLRC2P26717 231 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 SOX5P35711 763 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 MORC3Q14149 939 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 SMYD2Q9NRG4 433 aa13.1□□□□□ -0.31
UBE3B-203ENST00000434735 MYO1FO00160 1098 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 KCNB1Q14721 858 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 CAPN12Q6ZSI9 719 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 TM6SF1Q9BZW5 370 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 MTMR4Q9NYA4 1195 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 KCNJ18B7U540 433 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 CYP2C19P33261 490 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 CTCFP49711 727 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-203ENST00000434735 NLRP11P59045 1033 aaKnown RBP13.09□□□□□ -0.31
UBE3B-203ENST00000434735 KCNJ12Q14500 433 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 CYP26C1Q6V0L0 522 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 TBC1D10CQ8IV04 446 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 SYCE1Q8N0S2 351 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 CEP152O94986 1710 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 CCL23P55773 120 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 CES5AQ6NT32 575 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 KRT222Q8N1A0 295 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 ATP2A3Q93084 1043 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 RPGRIP1Q96KN7 1286 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 BAG1Q99933 345 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-203ENST00000434735 APOL5Q9BWW9 433 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 MST1RQ04912 1400 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 FBXW4P57775 412 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 TMTC3Q6ZXV5 915 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 TDRD7Q8NHU6 1098 aaKnown RBP13.09□□□□□ -0.31
UBE3B-203ENST00000434735 FOXP1Q9H334 677 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-203ENST00000434735 NME3Q13232 169 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 TADA2BQ86TJ2 420 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 ENAHQ8N8S7 591 aaPredicted RBP13.09□□□□□ -0.31
UBE3B-203ENST00000434735 ACER1Q8TDN7 264 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 DPP7Q9UHL4 492 aa13.09□□□□□ -0.31
UBE3B-203ENST00000434735 AGLP35573 1532 aa13.08□□□□□ -0.31
UBE3B-203ENST00000434735 TTLL13PA6NNM8 815 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 EBAG9O00559 213 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 CXCL11O14625 94 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 RHOXF2BP0C7M4 288 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 RPS6KA2Q15349 733 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 CEP55Q53EZ4 464 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 KIAA1755Q5JYT7 1200 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 STKLD1Q8NE28 680 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 DDX50Q9BQ39 737 aaKnown RBP13.08□□□□□ -0.32
UBE3B-203ENST00000434735 RHOXF2Q9BQY4 288 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 PRDM10Q9NQV6 1147 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 ITM2BQ9Y287 266 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 NFIAQ12857 509 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 DNAJC21Q5F1R6 531 aaKnown RBP13.08□□□□□ -0.32
UBE3B-203ENST00000434735 KLHL7Q8IXQ5 586 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 RNF217Q8TC41 542 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 CD99L2Q8TCZ2 262 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 MAIP1Q8WWC4 291 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 MAP4K1Q92918 833 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 SH3KBP1Q96B97 665 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 NYAP2Q9P242 653 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 MYL1P05976 194 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 PLCG1P19174 1290 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 PMLP29590 882 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 TCF7P36402 384 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-203ENST00000434735 DDR1Q08345 913 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 ALCAMQ13740 583 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 PPP6R3Q5H9R7 873 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-203ENST00000434735 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.08□□□□□ -0.32
UBE3B-203ENST00000434735 USP28Q96RU2 1077 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 FAM114A2Q9NRY5 505 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 ZMYND8Q9ULU4 1186 aaPredicted RBP13.08□□□□□ -0.32
UBE3B-203ENST00000434735 GLI2P10070 1586 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 DIP2AQ14689 1571 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 I3L4J1 428 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 IKBKBO14920 756 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 IQCB1Q15051 598 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 ADCK5Q3MIX3 580 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 UBE2OQ9C0C9 1292 aaKnown RBP13.08□□□□□ -0.32
UBE3B-203ENST00000434735 AMFRQ9UKV5 643 aa13.08□□□□□ -0.32
UBE3B-203ENST00000434735 NDUFV1P49821 464 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms