RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 MYMKA6NI61 221 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 ARVCFO00192 962 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 GAS2O43903 313 aaKnown RBP13.69□□□□□ -0.22
LINC00339-204ENST00000434233 COL6A1P12109 1028 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 GUCY2CP25092 1073 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 AFMP43652 599 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 CDK7P50613 346 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 TBC1D8BQ0IIM8 1120 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 KLHL40Q2TBA0 621 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 MARCH8Q5T0T0 291 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 MTHFD1LQ6UB35 978 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 GPBP1Q86WP2 473 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 STAMQ92783 540 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 SENP6Q9GZR1 1112 aaPredicted RBP13.69□□□□□ -0.22
LINC00339-204ENST00000434233 ARID2Q68CP9 1835 aa13.69□□□□□ -0.22
LINC00339-204ENST00000434233 EVPLQ92817 2033 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 GTPBP6O43824 516 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-204ENST00000434233 C22orf31O95567 290 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 POLGP54098 1239 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-204ENST00000434233 IGBP1P78318 339 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 GIT2Q14161 759 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 C1orf53Q5VUE5 145 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 IER5Q5VY09 327 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 SLC39A5Q6ZMH5 540 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 RETREG2Q8NC44 543 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 MCPH1Q8NEM0 835 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 LMBR1Q8WVP7 490 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 TRAPPC12Q8WVT3 735 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 TCP11Q8WWU5 503 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 SLC7A3Q8WY07 619 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 DDX12PQ92771 950 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 RUSC1Q9BVN2 902 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 TRIM9Q9C026 710 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 CLSTN2Q9H4D0 955 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 C11orf49Q9H6J7 331 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 ATP6V0A4Q9HBG4 840 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 PCDHA2Q9Y5H9 948 aa13.68□□□□□ -0.22
LINC00339-204ENST00000434233 TRIP12Q14669 1992 aaPredicted RBP13.68□□□□□ -0.22
LINC00339-204ENST00000434233 SMIM35A0A1B0GVV1 85 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 PVALEFA0A1B0GWK0 134 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 TRAK2O60296 914 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 USO1O60763 962 aaKnown RBP13.67□□□□□ -0.22
LINC00339-204ENST00000434233 KRT18P05783 430 aaKnown RBP13.67□□□□□ -0.22
LINC00339-204ENST00000434233 EN2P19622 333 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-204ENST00000434233 TMOD1P28289 359 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 DNM2P50570 870 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 DPYDQ12882 1025 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 HIC1Q14526 733 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 POSTNQ15063 836 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 FAM47CQ5HY64 1035 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 GDF6Q6KF10 455 aaPredicted RBP13.67□□□□□ -0.22
LINC00339-204ENST00000434233 EFCAB12Q6NXP0 572 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 NECAB2Q7Z6G3 386 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 LINC01465Q8N7H1 131 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 DNAJC19Q96DA6 116 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 ABHD8Q96I13 439 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 PAWRQ96IZ0 340 aaKnown RBP13.67□□□□□ -0.22
LINC00339-204ENST00000434233 XPNPEP1Q9NQW7 623 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 KCNG1Q9UIX4 513 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 TUBE1Q9UJT0 475 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 ODF2LQ9ULJ1 636 aa13.67□□□□□ -0.22
LINC00339-204ENST00000434233 ASAP2O43150 1006 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 TREHO43280 583 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 RPLP2P05387 115 aaKnown RBP13.66□□□□□ -0.22
LINC00339-204ENST00000434233 CYP2C9P11712 490 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 ARL2P36404 184 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 RTP1P59025 263 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 ZNF200P98182 395 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-204ENST00000434233 CDC42EP1Q00587 391 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 CUL4BQ13620 913 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 EMC2Q15006 297 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 SNX17Q15036 470 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 DYMQ7RTS9 669 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 GRAMD1CQ8IYS0 662 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 NME8Q8N427 588 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
LINC00339-204ENST00000434233 PPP1R13LQ8WUF5 828 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 KIFAP3Q92845 792 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 SYAP1Q96A49 352 aaPredicted RBP13.66□□□□□ -0.22
LINC00339-204ENST00000434233 NUP62CLQ9H1M0 184 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 SUGCTQ9HAC7 445 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 C17orf75Q9HAS0 396 aa13.66□□□□□ -0.22
LINC00339-204ENST00000434233 KIAA0100Q14667 2235 aaKnown RBP13.66□□□□□ -0.22
LINC00339-204ENST00000434233 MROH7Q68CQ1 1323 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 NPHP3-ACAD11A0A0J9YXS1 232 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 FRMD3A2A2Y4 597 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 HIP1RO75146 1068 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 SMC2O95347 1197 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 PRR29P0C7W0 189 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 SARSP49591 514 aaKnown RBP13.65□□□□□ -0.22
LINC00339-204ENST00000434233 ZNF131P52739 623 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 PTK7Q13308 1070 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 MKRN4PQ13434 485 aaPredicted RBP13.65□□□□□ -0.22
LINC00339-204ENST00000434233 PNOCQ13519 176 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 CAMK4Q16566 473 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 PTGISQ16647 500 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 FAM102BQ5T8I3 360 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 TAF2Q6P1X5 1199 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 UNC13DQ70J99 1090 aa13.65□□□□□ -0.22
LINC00339-204ENST00000434233 MAEAQ7L5Y9 396 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms