RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 PSAPP07602 524 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 SRGAP2BP0DMP2 458 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 LAG3P18627 525 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 CDC27P30260 824 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 MRE11P49959 708 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 FAM189BP81408 668 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 CBX2Q14781 532 aaPredicted RBP16.88■□□□□ 0.29
PRKDC-203ENST00000432581 PKN1Q16512 942 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 BMP8AQ7Z5Y6 402 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 FAM228AQ86W67 206 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 REXO1Q8N1G1 1221 aaKnown RBP16.88■□□□□ 0.29
PRKDC-203ENST00000432581 ZNF710Q8N1W2 664 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 METTL13Q8N6R0 699 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 OSMRQ99650 979 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 ZMYND12Q9H0C1 365 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 C6orf50Q9HD87 102 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 TYW1Q9NV66 732 aaKnown RBP16.88■□□□□ 0.29
PRKDC-203ENST00000432581 NAP1L2Q9ULW6 460 aaPredicted RBP16.88■□□□□ 0.29
PRKDC-203ENST00000432581 LZTS1Q9Y250 596 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 PCDHA10Q9Y5I2 948 aa16.88■□□□□ 0.29
PRKDC-203ENST00000432581 FSCN2O14926 492 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 MAGEB2O15479 319 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 HOXA2O43364 376 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 GPR32O75388 356 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 ATF7P17544 494 aaPredicted RBP16.87■□□□□ 0.29
PRKDC-203ENST00000432581 METAP2P50579 478 aaKnown RBP eCLIP16.87■□□□□ 0.29
PRKDC-203ENST00000432581 FGD1P98174 961 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 DSC3Q14574 896 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 DUSP6Q16828 381 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 ADCK5Q3MIX3 580 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 TRIM67Q6ZTA4 783 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 RASEFQ8IZ41 740 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 FAM167AQ96KS9 214 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 PPP1R16BQ96T49 567 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 TMEM117Q9H0C3 514 aa16.87■□□□□ 0.29
PRKDC-203ENST00000432581 PUF60Q9UHX1 559 aaKnown RBP16.87■□□□□ 0.29
PRKDC-203ENST00000432581 PER2O15055 1255 aa16.86■□□□□ 0.29
PRKDC-203ENST00000432581 VTNP04004 478 aa16.86■□□□□ 0.29
PRKDC-203ENST00000432581 FGFR1P11362 822 aa16.86■□□□□ 0.29
PRKDC-203ENST00000432581 TMOD1P28289 359 aa16.86■□□□□ 0.29
PRKDC-203ENST00000432581 GNA11P29992 359 aa16.86■□□□□ 0.29
PRKDC-203ENST00000432581 ADD1P35611 737 aaKnown RBP16.86■□□□□ 0.29
PRKDC-203ENST00000432581 ERVFC1P60507 584 aa16.86■□□□□ 0.29
PRKDC-203ENST00000432581 ZXDAP98168 799 aa16.86■□□□□ 0.29
PRKDC-203ENST00000432581 PLCB3Q01970 1234 aa16.86■□□□□ 0.29
PRKDC-203ENST00000432581 SUSD6Q92537 303 aa16.86■□□□□ 0.29
PRKDC-203ENST00000432581 MAP7D2Q96T17 732 aa16.86■□□□□ 0.29
PRKDC-203ENST00000432581 CWH43Q9H720 699 aa16.86■□□□□ 0.29
PRKDC-203ENST00000432581 ZNF318Q5VUA4 2279 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 TMEM221A6NGB7 291 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 WDR64B1ANS9 1081 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 M0R296 226 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 CIITAP33076 1130 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 PPM1AP35813 382 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 PRR16Q569H4 304 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 TMEM184AQ6ZMB5 413 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 LRRC43Q8N309 656 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 VN1R2Q8NFZ6 395 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 BICD2Q8TD16 824 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 RASGRP4Q8TDF6 673 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 MRPS27Q92552 414 aaKnown RBP16.85■□□□□ 0.29
PRKDC-203ENST00000432581 PBXIP1Q96AQ6 731 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 PRRX2Q99811 253 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 NGRNQ9NPE2 291 aaKnown RBP16.85■□□□□ 0.29
PRKDC-203ENST00000432581 HCSTQ9UBK5 93 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 GABBR1Q9UBS5 961 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 AKT3Q9Y243 479 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 TECTAO75443 2155 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 C5orf42Q9H799 3197 aa16.85■□□□□ 0.29
PRKDC-203ENST00000432581 KIAA1671Q9BY89 1806 aa16.84■□□□□ 0.29
PRKDC-203ENST00000432581 ZSCAN20P17040 1043 aaPredicted RBP16.84■□□□□ 0.29
PRKDC-203ENST00000432581 CLCN3P51790 818 aa16.84■□□□□ 0.29
PRKDC-203ENST00000432581 NLRP11P59045 1033 aaKnown RBP16.84■□□□□ 0.29
PRKDC-203ENST00000432581 PLPP4Q5VZY2 271 aa16.84■□□□□ 0.29
PRKDC-203ENST00000432581 EFCAB12Q6NXP0 572 aa16.84■□□□□ 0.29
PRKDC-203ENST00000432581 TRMT1LQ7Z2T5 733 aaKnown RBP16.84■□□□□ 0.29
PRKDC-203ENST00000432581 SUGP1Q8IWZ8 645 aaKnown RBP16.84■□□□□ 0.29
PRKDC-203ENST00000432581 ABI1Q8IZP0 508 aa16.84■□□□□ 0.29
PRKDC-203ENST00000432581 LINC01465Q8N7H1 131 aa16.84■□□□□ 0.29
PRKDC-203ENST00000432581 RPGRIP1Q96KN7 1286 aa16.84■□□□□ 0.29
PRKDC-203ENST00000432581 CASD1Q96PB1 797 aa16.84■□□□□ 0.29
PRKDC-203ENST00000432581 TCF25Q9BQ70 676 aa16.84■□□□□ 0.29
PRKDC-203ENST00000432581 ENTPD7Q9NQZ7 604 aa16.84■□□□□ 0.29
PRKDC-203ENST00000432581 SAMM50Q9Y512 469 aa16.84■□□□□ 0.29
PRKDC-203ENST00000432581 PRPF3O43395 683 aaKnown RBP16.83■□□□□ 0.28
PRKDC-203ENST00000432581 EIF4BP23588 611 aaKnown RBP16.83■□□□□ 0.28
PRKDC-203ENST00000432581 RBM10P98175 930 aaKnown RBP16.83■□□□□ 0.28
PRKDC-203ENST00000432581 AKAP17AQ02040 695 aaKnown RBP16.83■□□□□ 0.28
PRKDC-203ENST00000432581 KRT17Q04695 432 aa16.83■□□□□ 0.28
PRKDC-203ENST00000432581 APOBRQ0VD83 1088 aa16.83■□□□□ 0.28
PRKDC-203ENST00000432581 KCNC3Q14003 757 aa16.83■□□□□ 0.28
PRKDC-203ENST00000432581 NID2Q14112 1375 aa16.83■□□□□ 0.28
PRKDC-203ENST00000432581 KCNT2Q6UVM3 1135 aa16.83■□□□□ 0.28
PRKDC-203ENST00000432581 CCDC148Q8NFR7 591 aa16.83■□□□□ 0.28
PRKDC-203ENST00000432581 ZNF558Q96NG5 402 aa16.83■□□□□ 0.28
PRKDC-203ENST00000432581 ADAMTS10Q9H324 1103 aa16.83■□□□□ 0.28
PRKDC-203ENST00000432581 NRBP2Q9NSY0 501 aa16.83■□□□□ 0.28
PRKDC-203ENST00000432581 CDC45O75419 566 aa16.82■□□□□ 0.28
PRKDC-203ENST00000432581 OATP04181 439 aa16.82■□□□□ 0.28
PRKDC-203ENST00000432581 HOXB8P17481 243 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms