RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 GLE1Q53GS7 698 aaKnown RBP13.56□□□□□ -0.24
CDH3-202ENST00000429102 TBC1D1Q86TI0 1168 aaPredicted RBP13.56□□□□□ -0.24
CDH3-202ENST00000429102 CCDC26Q8TAB7 109 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 FMO2Q99518 471 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 P2RX7Q99572 595 aaKnown RBP13.56□□□□□ -0.24
CDH3-202ENST00000429102 SLC40A1Q9NP59 571 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 KLC4Q9NSK0 619 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 GPR75-ASB3A0A0A6YYF3 556 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 HMGB1P1B2RPK0 211 aaPredicted RBP13.56□□□□□ -0.24
CDH3-202ENST00000429102 DNM1LO00429 736 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 EXOC3O60645 756 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 PSMD2Q13200 908 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 GIT2Q14161 759 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 ZCWPW2Q504Y3 356 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 HP1BP3Q5SSJ5 553 aaPredicted RBP13.56□□□□□ -0.24
CDH3-202ENST00000429102 FAM186BQ8IYM0 893 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 SEC16BQ96JE7 1060 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 ISCUQ9H1K1 167 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 KCTD10Q9H3F6 313 aa13.56□□□□□ -0.24
CDH3-202ENST00000429102 FAM86B1E9PN63 330 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 EML1O00423 815 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 ACSL3O95573 720 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 FAM86B2P0C5J1 330 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 PPP2R2AP63151 447 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 TMEM119Q4V9L6 283 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 ASPRV1Q53RT3 343 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 FBXO25Q8TCJ0 367 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 STK38LQ9Y2H1 464 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 LEMD3Q9Y2U8 911 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 PCDHGC5Q9Y5F6 944 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 RPS6KA4O75676 772 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 SKOR1P84550 965 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 EPC2Q52LR7 807 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 CCDC91Q7Z6B0 441 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 ARFGAP2Q8N6H7 521 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 GDAP1Q8TB36 358 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 SLC20A1Q8WUM9 679 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 CCDC127Q96BQ5 260 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 MYCBPQ99417 103 aaPredicted RBP13.55□□□□□ -0.24
CDH3-202ENST00000429102 MYH3P11055 1940 aa13.55□□□□□ -0.24
CDH3-202ENST00000429102 LCA5LO95447 670 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 FAM107AO95990 144 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 PPP4CP60510 307 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 DR1Q01658 176 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 TNIP1Q15025 636 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 SEPT14Q6ZU15 432 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 CCDC105Q8IYK2 499 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 PROM2Q8N271 834 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 CACNA1SQ13698 1873 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 SLC29A2Q14542 456 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 FAM182AQ5T1J6 154 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 RUFY4Q6ZNE9 571 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 TAB3Q8N5C8 712 aaPredicted RBP13.54□□□□□ -0.24
CDH3-202ENST00000429102 BANK1Q8NDB2 785 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 KRT35Q92764 455 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 OSBPL7Q9BZF2 842 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 MTFR1LQ9H019 292 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 NUCKS1Q9H1E3 243 aaKnown RBP13.54□□□□□ -0.24
CDH3-202ENST00000429102 RABGAP1Q9Y3P9 1069 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 DAAM1Q9Y4D1 1078 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 CHN1P15882 459 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 GCLMP48507 274 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 MTM1Q13496 603 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 CBWD6Q4V339 395 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 CBWD3Q5JTY5 395 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 CBWD5Q5RIA9 395 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 DAB2IPQ5VWQ8 1189 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 PRR5LQ6MZQ0 368 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 EPS8L3Q8TE67 593 aaKnown RBP13.54□□□□□ -0.24
CDH3-202ENST00000429102 KAT5Q92993 513 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 PWWP2AQ96N64 755 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 SEMA4AQ9H3S1 761 aa13.54□□□□□ -0.24
CDH3-202ENST00000429102 UBE2TQ9NPD8 197 aaPredicted RBP13.54□□□□□ -0.24
CDH3-202ENST00000429102 MYH14Q7Z406 1995 aaKnown RBP13.54□□□□□ -0.24
CDH3-202ENST00000429102 CALUO43852 315 aaPredicted RBP13.53□□□□□ -0.24
CDH3-202ENST00000429102 HLA-DOAP06340 250 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 HOXD13P35453 343 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 SP4Q02446 784 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 IFI16Q16666 785 aaKnown RBP13.53□□□□□ -0.24
CDH3-202ENST00000429102 ODR4Q5SWX8 454 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 GKAP1Q5VSY0 366 aaPredicted RBP13.53□□□□□ -0.24
CDH3-202ENST00000429102 MSL1Q68DK7 614 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 TBC1D16Q8TBP0 767 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 DYDC2Q96IM9 177 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 CEP63Q96MT8 703 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 PRMT1Q99873 361 aaKnown RBP13.53□□□□□ -0.24
CDH3-202ENST00000429102 PLCB1Q9NQ66 1216 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 PARP4Q9UKK3 1724 aaKnown RBP13.53□□□□□ -0.24
CDH3-202ENST00000429102 TMEM150BA6NC51 233 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 RGS16O15492 202 aaPredicted RBP13.53□□□□□ -0.24
CDH3-202ENST00000429102 GNA14O95837 355 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 MMEP08473 750 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 NAA25Q14CX7 972 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 KIF2BQ8N4N8 673 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 ERMNQ8TAM6 284 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 LNX1Q8TBB1 728 aaPredicted RBP13.53□□□□□ -0.24
CDH3-202ENST00000429102 AIPL1Q9NZN9 384 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 RNF14Q9UBS8 474 aa13.53□□□□□ -0.24
CDH3-202ENST00000429102 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms