RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 KRT33BQ14525 404 aa10.49□□□□□ -0.73
SNX13-203ENST00000428135 RSBN1LQ6PCB5 846 aaPredicted RBP10.49□□□□□ -0.73
SNX13-203ENST00000428135 ZNF34Q8IZ26 560 aa10.49□□□□□ -0.73
SNX13-203ENST00000428135 SPDYE1Q8NFV5 336 aaPredicted RBP10.49□□□□□ -0.73
SNX13-203ENST00000428135 EPB41L5Q9HCM4 733 aa10.49□□□□□ -0.73
SNX13-203ENST00000428135 ZNF521Q96K83 1311 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 PASKQ96RG2 1323 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 PSMD2Q13200 908 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 ARMCX2Q7L311 632 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 RWDD2AQ9UIY3 292 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 PHKA2P46019 1235 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 PRPF31Q8WWY3 499 aaKnown RBP10.48□□□□□ -0.73
SNX13-203ENST00000428135 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 HAUS4Q9H6D7 363 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 FAM217BQ9NTX9 383 aaPredicted RBP10.48□□□□□ -0.73
SNX13-203ENST00000428135 IPO11Q9UI26 975 aaKnown RBP10.48□□□□□ -0.73
SNX13-203ENST00000428135 CCNE1P24864 410 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 HOXD10P28358 340 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 TMED2Q15363 201 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 ZKSCAN8Q15776 578 aaPredicted RBP10.48□□□□□ -0.73
SNX13-203ENST00000428135 CDC42EP5Q6NZY7 148 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 THEM5Q8N1Q8 247 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 FBXO40Q9UH90 709 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 HEY1Q9Y5J3 304 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 LMTK2Q8IWU2 1503 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 EEF1GP26641 437 aaKnown RBP10.48□□□□□ -0.73
SNX13-203ENST00000428135 GPC3P51654 580 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 GNGT1P63211 74 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 ARID5BQ14865 1188 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 WHAMMP3Q1A5X7 153 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 ANO4Q32M45 955 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 ACCSLQ4AC99 568 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 TCP11X2Q5H9J9 407 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 JADE1Q6IE81 842 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 PSPC1Q8WXF1 523 aaKnown RBP10.48□□□□□ -0.73
SNX13-203ENST00000428135 ZKSCAN4Q969J2 545 aaPredicted RBP10.48□□□□□ -0.73
SNX13-203ENST00000428135 NSUN4Q96CB9 384 aaKnown RBP10.48□□□□□ -0.73
SNX13-203ENST00000428135 PCSK1NQ9UHG2 260 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 GOLGA8MH3BSY2 632 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 S100BP04271 92 aaPredicted RBP10.48□□□□□ -0.73
SNX13-203ENST00000428135 PCK1P35558 622 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 BAATQ14032 418 aaPredicted RBP10.48□□□□□ -0.73
SNX13-203ENST00000428135 ATG9AQ7Z3C6 839 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 IQCDQ96DY2 449 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 CFAP57Q96MR6 1250 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 DNAJC12Q9UKB3 198 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 RCOR1Q9UKL0 485 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 CDHR2Q9BYE9 1310 aa10.48□□□□□ -0.73
SNX13-203ENST00000428135 WDR46O15213 610 aaKnown RBP10.47□□□□□ -0.73
SNX13-203ENST00000428135 SOX5P35711 763 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 KRT31Q15323 416 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 TTC31Q49AM3 519 aaPredicted RBP10.47□□□□□ -0.73
SNX13-203ENST00000428135 RNF217Q8TC41 542 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 TMEM143Q96AN5 459 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 ATP8B3O60423 1300 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 MEGF6O75095 1541 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 HUS1O60921 280 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 CPB1P15086 417 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 EPHX2P34913 555 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 AP3B2Q13367 1082 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 THOC5Q13769 683 aaKnown RBP10.47□□□□□ -0.73
SNX13-203ENST00000428135 HP1BP3Q5SSJ5 553 aaPredicted RBP10.47□□□□□ -0.73
SNX13-203ENST00000428135 LRRC43Q8N309 656 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 RPGRIP1Q96KN7 1286 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 GOLPH3LQ9H4A5 285 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 ZNF70Q9UC06 446 aaPredicted RBP10.47□□□□□ -0.73
SNX13-203ENST00000428135 NCOA3Q9Y6Q9 1424 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 BAG2O95816 211 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 TCP1P17987 556 aaKnown RBP10.47□□□□□ -0.73
SNX13-203ENST00000428135 COASYQ13057 564 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 RCN2Q14257 317 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 DEFB129Q9H1M3 183 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 PCDHA13Q9Y5I0 950 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 DPYSL4O14531 572 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 PFDN6O15212 129 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 FOXN1O15353 648 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 TROVE2P10155 538 aaKnown RBP eCLIP10.47□□□□□ -0.73
SNX13-203ENST00000428135 NUMBP49757 651 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 SESN3P58005 492 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 GRM4Q14833 912 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 HABP4Q5JVS0 413 aaKnown RBP10.47□□□□□ -0.73
SNX13-203ENST00000428135 SRBD1Q8N5C6 995 aaKnown RBP10.47□□□□□ -0.73
SNX13-203ENST00000428135 RNF149Q8NC42 400 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 CDKL2Q92772 493 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 EIF2AK1Q9BQI3 630 aaKnown RBP10.47□□□□□ -0.73
SNX13-203ENST00000428135 NUF2Q9BZD4 464 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 PIN4Q9Y237 131 aaKnown RBP10.47□□□□□ -0.73
SNX13-203ENST00000428135 FLT1P17948 1338 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 PRCPP42785 496 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 QARSP47897 775 aaKnown RBP10.47□□□□□ -0.73
SNX13-203ENST00000428135 IQCB1Q15051 598 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 KDELC2Q7Z4H8 507 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 URGCPQ8TCY9 931 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 RAD54LQ92698 747 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 SIK2Q9H0K1 926 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
SNX13-203ENST00000428135 FAM205CA6NFA0 338 aa10.46□□□□□ -0.73
SNX13-203ENST00000428135 HEXIM1O94992 359 aaKnown RBP10.46□□□□□ -0.73
SNX13-203ENST00000428135 NR3C1P04150 777 aa10.46□□□□□ -0.73
SNX13-203ENST00000428135 TRIM49P0CI25 452 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms