RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TMEM179Q6ZVK1 233 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 TAS2R42Q7RTR8 314 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 TRIM59Q8IWR1 403 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 THNSL1Q8IYQ7 743 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 SLC26A7Q8TE54 656 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 BHMTQ93088 406 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 MTBPQ96DY7 904 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 CEP19Q96LK0 163 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 NLRC4Q9NPP4 1024 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 KIAA1024Q9UPX6 916 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 NDUFB9Q9Y6M9 179 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 PASKQ96RG2 1323 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 USP17L10C9JJH3 530 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 CAND2O75155 1236 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 APOA4P06727 396 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 VCAM1P19320 739 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 CRKP46108 304 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 MAPK6Q16659 721 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 ZNF394Q53GI3 561 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 CAPN12Q6ZSI9 719 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.14□□□□□ -1.43
HERC4-206ENST00000427635 TSEN34Q9BSV6 310 aaKnown RBP6.14□□□□□ -1.43
HERC4-206ENST00000427635 LCMT1Q9UIC8 334 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 SERPINB13Q9UIV8 391 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 AOX1Q06278 1338 aa6.14□□□□□ -1.43
HERC4-206ENST00000427635 BPNT1O95861 308 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 ARHGEF7Q14155 803 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 TCEAL1Q15170 157 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 ANO4Q32M45 955 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 TAF1BQ53T94 588 aaPredicted RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 ZNF667Q5HYK9 610 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 IER5Q5VY09 327 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 PKN3Q6P5Z2 889 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 ADCK2Q7Z695 626 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 ARHGEF25Q86VW2 580 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 KLHL23Q8NBE8 558 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 HSPH1Q92598 858 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 LZTS1Q9Y250 596 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 RRP15Q9Y3B9 282 aaKnown RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 TMEM94Q12767 1356 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 SPDYE5A6NIY4 337 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 KRIT1O00522 736 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 ZNF189O75820 626 aaPredicted RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 CD58P19256 250 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 EIF2AK2P19525 551 aaKnown RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 HUNKP57058 714 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 KIF19Q2TAC6 998 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 ZNF568Q3ZCX4 644 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 SPDYE7PQ495Y7 208 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 RRM2BQ7LG56 351 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 AFAP1L1Q8TED9 768 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 GPKOWQ92917 476 aaPredicted RBP eCLIP6.13□□□□□ -1.43
HERC4-206ENST00000427635 EGFL8Q99944 293 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 CD248Q9HCU0 757 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 SARS2Q9NP81 518 aaKnown RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 FAM207AQ9NSI2 230 aaPredicted RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.13□□□□□ -1.433e-7■■■□□ 16.3
HERC4-206ENST00000427635 DAAM1Q9Y4D1 1078 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 TBX3O15119 743 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 IRF1P10914 325 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 GEMIN4P57678 1058 aaKnown RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 POU5F1BQ06416 359 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 MED21Q13503 144 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 EXOC3L4Q17RC7 722 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 SUGP1Q8IWZ8 645 aaKnown RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 APPL2Q8NEU8 664 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 NCLNQ969V3 563 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 ARL8AQ96BM9 186 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 ZNF560Q96MR9 790 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 EFHD1Q9BUP0 239 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 USP26Q9BXU7 913 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 GIMAP4Q9NUV9 329 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 MAGED1Q9Y5V3 778 aaPredicted RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 NEURL1BA8MQ27 555 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 CAPN2P17655 700 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 IGFBP4P22692 258 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 CPT1AP50416 773 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 FAPQ12884 760 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 AARS2Q5JTZ9 985 aaKnown RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 TOGARAM2Q6ZUX3 1019 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 LGR6Q9HBX8 967 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 PCDH12Q9NPG4 1184 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 CASS4Q9NQ75 786 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 ERBB4Q15303 1308 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 FAM170AA1A519 330 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 KPNA1P52294 538 aaPredicted RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 TMED2Q15363 201 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 CDC37Q16543 378 aaPredicted RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 KRT40Q6A162 431 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 ZCCHC8Q6NZY4 707 aaKnown RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 ARRDC4Q8NCT1 418 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 NUDT12Q9BQG2 462 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 SPZ1Q9BXG8 430 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 RAVER2Q9HCJ3 691 aaKnown RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 SLC25A13Q9UJS0 675 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 ZMYM6O95789 1325 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 POLR3AO14802 1390 aaPredicted RBP6.13□□□□□ -1.43
HERC4-206ENST00000427635 UGGT2Q9NYU1 1516 aa6.13□□□□□ -1.43
HERC4-206ENST00000427635 BUB1BO60566 1050 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms