RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ZC3H12BQ5HYM0 836 aaKnown RBP7.48□□□□□ -1.21
LINC01040-201ENST00000425048 SPTY2D1Q68D10 685 aaPredicted RBP7.48□□□□□ -1.21
LINC01040-201ENST00000425048 VWA7Q9Y334 891 aa7.48□□□□□ -1.21
LINC01040-201ENST00000425048 NBPF6Q5VWK0 638 aa7.47□□□□□ -1.21
LINC01040-201ENST00000425048 LARP4BQ92615 738 aaKnown RBP7.47□□□□□ -1.21
LINC01040-201ENST00000425048 RABGGTAQ92696 567 aa7.47□□□□□ -1.21
LINC01040-201ENST00000425048 DLG3Q92796 817 aa7.47□□□□□ -1.21
LINC01040-201ENST00000425048 LPPQ93052 612 aa7.47□□□□□ -1.21
LINC01040-201ENST00000425048 MAGEB10Q96LZ2 347 aaPredicted RBP7.47□□□□□ -1.21
LINC01040-201ENST00000425048 NBPF4Q96M43 638 aa7.47□□□□□ -1.21
LINC01040-201ENST00000425048 SIRPGQ9P1W8 387 aa7.47□□□□□ -1.21
LINC01040-201ENST00000425048 REXO2Q9Y3B8 237 aaKnown RBP7.47□□□□□ -1.21
LINC01040-201ENST00000425048 B3GALT1Q9Y5Z6 326 aa7.47□□□□□ -1.21
LINC01040-201ENST00000425048 KDM2BQ8NHM5 1336 aa7.47□□□□□ -1.21
LINC01040-201ENST00000425048 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.46□□□□□ -1.22
LINC01040-201ENST00000425048 MAFO75444 373 aaPredicted RBP7.46□□□□□ -1.22
LINC01040-201ENST00000425048 PEX11BO96011 259 aa7.46□□□□□ -1.22
LINC01040-201ENST00000425048 SDHAP31040 664 aa7.46□□□□□ -1.22
LINC01040-201ENST00000425048 CRHR2Q13324 411 aa7.46□□□□□ -1.22
LINC01040-201ENST00000425048 RIN1Q13671 783 aa7.46□□□□□ -1.22
LINC01040-201ENST00000425048 RRP1BQ14684 758 aaKnown RBP7.46□□□□□ -1.22
LINC01040-201ENST00000425048 ANKRD35Q8N283 1001 aa7.46□□□□□ -1.22
LINC01040-201ENST00000425048 CELF4Q9BZC1 486 aaKnown RBP7.46□□□□□ -1.22
LINC01040-201ENST00000425048 SLC52A2Q9HAB3 445 aa7.46□□□□□ -1.22
LINC01040-201ENST00000425048 NDOR1Q9UHB4 597 aa7.46□□□□□ -1.22
LINC01040-201ENST00000425048 COQ6Q9Y2Z9 468 aa7.46□□□□□ -1.22
LINC01040-201ENST00000425048 CTDP1Q9Y5B0 961 aaPredicted RBP7.46□□□□□ -1.22
LINC01040-201ENST00000425048 SLC12A8A0AV02 714 aa7.45□□□□□ -1.22
LINC01040-201ENST00000425048 RASSF10A6NK89 507 aa7.45□□□□□ -1.22
LINC01040-201ENST00000425048 SESN2P58004 480 aaPredicted RBP7.45□□□□□ -1.22
LINC01040-201ENST00000425048 ADAM15Q13444 863 aa7.45□□□□□ -1.22
LINC01040-201ENST00000425048 TMEM132BQ14DG7 1078 aa7.45□□□□□ -1.22
LINC01040-201ENST00000425048 TM4SF20Q53R12 229 aa7.45□□□□□ -1.22
LINC01040-201ENST00000425048 MRGPRGQ86SM5 289 aa7.45□□□□□ -1.22
LINC01040-201ENST00000425048 LDLRAD3Q86YD5 345 aa7.45□□□□□ -1.22
LINC01040-201ENST00000425048 CLIP3Q96DZ5 547 aa7.45□□□□□ -1.22
LINC01040-201ENST00000425048 SH3BP1Q9Y3L3 701 aa7.45□□□□□ -1.22
LINC01040-201ENST00000425048 A0A1W2PRX2 142 aa7.44□□□□□ -1.22
LINC01040-201ENST00000425048 HIP1RO75146 1068 aa7.44□□□□□ -1.22
LINC01040-201ENST00000425048 H2AFYO75367 372 aaKnown RBP7.44□□□□□ -1.22
LINC01040-201ENST00000425048 ATP2C1P98194 919 aaPredicted RBP7.44□□□□□ -1.22
LINC01040-201ENST00000425048 KLHDC10Q6PID8 442 aa7.44□□□□□ -1.22
LINC01040-201ENST00000425048 OVCH1Q7RTY7 1134 aa7.44□□□□□ -1.22
LINC01040-201ENST00000425048 ZNF575Q86XF7 245 aa7.44□□□□□ -1.22
LINC01040-201ENST00000425048 GSTCDQ8NEC7 633 aa7.44□□□□□ -1.22
LINC01040-201ENST00000425048 ZNF428Q96B54 188 aa7.44□□□□□ -1.22
LINC01040-201ENST00000425048 SLC2A4RGQ9NR83 387 aa7.44□□□□□ -1.22
LINC01040-201ENST00000425048 CCDC9Q9Y3X0 531 aaKnown RBP7.44□□□□□ -1.22
LINC01040-201ENST00000425048 NPTXRO95502 500 aa7.43□□□□□ -1.22
LINC01040-201ENST00000425048 ADCY7P51828 1080 aa7.43□□□□□ -1.22
LINC01040-201ENST00000425048 GSPT2Q8IYD1 628 aaKnown RBP7.43□□□□□ -1.22
LINC01040-201ENST00000425048 ULK2Q8IYT8 1036 aa7.43□□□□□ -1.22
LINC01040-201ENST00000425048 BCL6BQ8N143 479 aaPredicted RBP7.43□□□□□ -1.22
LINC01040-201ENST00000425048 ERCC4Q92889 916 aaPredicted RBP7.43□□□□□ -1.22
LINC01040-201ENST00000425048 GFM2Q969S9 779 aaKnown RBP7.43□□□□□ -1.22
LINC01040-201ENST00000425048 PRRX2Q99811 253 aa7.43□□□□□ -1.22
LINC01040-201ENST00000425048 SLC6A15Q9H2J7 730 aa7.43□□□□□ -1.22
LINC01040-201ENST00000425048 SAE1Q9UBE0 346 aaPredicted RBP7.43□□□□□ -1.22
LINC01040-201ENST00000425048 RASGRP1O95267 797 aa7.42□□□□□ -1.22
LINC01040-201ENST00000425048 ATP2B1P20020 1258 aa7.42□□□□□ -1.22
LINC01040-201ENST00000425048 CATSPEREQ5SY80 951 aa7.42□□□□□ -1.22
LINC01040-201ENST00000425048 FSTL4Q6MZW2 842 aa7.42□□□□□ -1.22
LINC01040-201ENST00000425048 DNAJC10Q8IXB1 793 aa7.42□□□□□ -1.22
LINC01040-201ENST00000425048 C2orf69Q8N8R5 385 aa7.42□□□□□ -1.22
LINC01040-201ENST00000425048 SLC7A14Q8TBB6 771 aa7.42□□□□□ -1.22
LINC01040-201ENST00000425048 MIEF2Q96C03 454 aa7.42□□□□□ -1.22
LINC01040-201ENST00000425048 PPFIA2O75334 1257 aa7.41□□□□□ -1.22
LINC01040-201ENST00000425048 NANOS3P60323 173 aaKnown RBP7.41□□□□□ -1.22
LINC01040-201ENST00000425048 ZC3H6P61129 1189 aaKnown RBP7.41□□□□□ -1.22
LINC01040-201ENST00000425048 ALDH6A1Q02252 535 aaKnown RBP7.41□□□□□ -1.22
LINC01040-201ENST00000425048 KRTAP1-1Q07627 177 aa7.41□□□□□ -1.22
LINC01040-201ENST00000425048 CNGB1Q14028 1251 aaPredicted RBP7.41□□□□□ -1.22
LINC01040-201ENST00000425048 SAFB2Q14151 953 aaKnown RBP eCLIP7.41□□□□□ -1.22
LINC01040-201ENST00000425048 ZNF662Q6ZS27 426 aa7.41□□□□□ -1.22
LINC01040-201ENST00000425048 ZNF627Q7L945 461 aa7.41□□□□□ -1.22
LINC01040-201ENST00000425048 LRP10Q7Z4F1 713 aa7.41□□□□□ -1.22
LINC01040-201ENST00000425048 GCDHQ92947 438 aaPredicted RBP7.41□□□□□ -1.22
LINC01040-201ENST00000425048 E2F7Q96AV8 911 aa7.41□□□□□ -1.22
LINC01040-201ENST00000425048 SLC7A6OSQ96CW6 309 aaPredicted RBP7.41□□□□□ -1.22
LINC01040-201ENST00000425048 ZG16BQ96DA0 208 aa7.41□□□□□ -1.22
LINC01040-201ENST00000425048 GOLGA8BA8MQT2 603 aa7.4□□□□□ -1.22
LINC01040-201ENST00000425048 RAMP2O60895 175 aa7.4□□□□□ -1.22
LINC01040-201ENST00000425048 STAT3P40763 770 aa7.4□□□□□ -1.22
LINC01040-201ENST00000425048 KRTAP15-1Q3LI76 137 aa7.4□□□□□ -1.22
LINC01040-201ENST00000425048 TRIM61Q5EBN2 209 aa7.4□□□□□ -1.22
LINC01040-201ENST00000425048 CC2D1AQ6P1N0 951 aaPredicted RBP7.4□□□□□ -1.22
LINC01040-201ENST00000425048 FOXRED1Q96CU9 486 aaPredicted RBP7.4□□□□□ -1.22
LINC01040-201ENST00000425048 SCLYQ96I15 445 aa7.4□□□□□ -1.22
LINC01040-201ENST00000425048 FOXB1Q99853 325 aa7.4□□□□□ -1.22
LINC01040-201ENST00000425048 DENND2AQ9ULE3 1009 aa7.4□□□□□ -1.22
LINC01040-201ENST00000425048 DMRT1Q9Y5R6 373 aa7.4□□□□□ -1.22
LINC01040-201ENST00000425048 CCDC163A0A0D9SF12 145 aa7.39□□□□□ -1.23
LINC01040-201ENST00000425048 KCNA6P17658 529 aa7.39□□□□□ -1.23
LINC01040-201ENST00000425048 SCNN1GP51170 649 aa7.39□□□□□ -1.23
LINC01040-201ENST00000425048 IRF9Q00978 393 aa7.39□□□□□ -1.23
LINC01040-201ENST00000425048 ACAP1Q15027 740 aa7.39□□□□□ -1.23
LINC01040-201ENST00000425048 NAALADL2Q58DX5 795 aa7.39□□□□□ -1.23
LINC01040-201ENST00000425048 RTN4RL1Q86UN2 441 aaPredicted RBP7.39□□□□□ -1.23
LINC01040-201ENST00000425048 RPL10LQ96L21 214 aaKnown RBP7.39□□□□□ -1.23
LINC01040-201ENST00000425048 IGSF5Q9NSI5 407 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms