RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ZBTB41Q5SVQ8 909 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ACBD5Q5T8D3 534 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D3GQ6DHY5 549 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D3CQ6IPX1 549 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 LPCAT2Q7L5N7 544 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TREML1Q86YW5 311 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TBC1D3Q8IZP1 549 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF557Q8N988 423 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 CDX2Q99626 313 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ABHD16BQ9H3Z7 469 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ATG3Q9NT62 314 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 DONSONQ9NYP3 566 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 RTL9Q8NET4 1388 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 FAM47E-STBD1D6RA91 191 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 INO80B-WBP1J3KQ70 363 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 KIF3CO14782 793 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 WDR46O15213 610 aaKnown RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 LZTS3O60299 673 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TAF5LO75529 589 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 BRD2P25440 801 aaKnown RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 AKT1P31749 480 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 DNA2P51530 1060 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 AP1B1Q10567 949 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 NCAPHQ15003 741 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 FILIP1LQ4L180 1135 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 RINT1Q6NUQ1 792 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 CHMP1BQ7LBR1 199 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ZFPM1Q8IX07 1006 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 OSCP1Q8WVF1 389 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TSNARE1Q96NA8 513 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 EYA1Q99502 592 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 PDGFDQ9GZP0 370 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 LUC7LQ9NQ29 371 aaKnown RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 SLC25A13Q9UJS0 675 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ZNF711Q9Y462 761 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ARRB1P49407 418 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 CNKSR3Q6P9H4 555 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 IL27RAQ6UWB1 636 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ARMCX2Q7L311 632 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 JMYQ8N9B5 988 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 PIGKQ92643 395 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ARL8AQ96BM9 186 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 RAD9AQ99638 391 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 SLC38A7Q9NVC3 462 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 SPG21Q9NZD8 308 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 PRKAG3Q9UGI9 489 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 PLA2G4CQ9UP65 541 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 ABCC6O95255 1503 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 SOWAHBA6NEL2 793 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 SHISA7A6NL88 538 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 IGSF3O75054 1194 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 FGFR1OPO95684 399 aaKnown RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 HOXB8P17481 243 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 PPP4R4Q6NUP7 873 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 EPS8L1Q8TE68 723 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 RAVER2Q9HCJ3 691 aaKnown RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 NGRNQ9NPE2 291 aaKnown RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 UXTQ9UBK9 157 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 FTSJ1Q9UET6 329 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 SERPINB13Q9UIV8 391 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 FRMPD2Q68DX3 1309 aaPredicted RBP3.89□□□□□ -1.79
TOP2A-201ENST00000423485 PIEZO2Q9H5I5 2752 aa3.89□□□□□ -1.79
TOP2A-201ENST00000423485 TAF1LQ8IZX4 1826 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 PAPPAQ13219 1627 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 C10orf71Q711Q0 1435 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 ZC3H11AO75152 810 aaKnown RBP eCLIP3.88□□□□□ -1.797e-13■■■■□ 22.1
TOP2A-201ENST00000423485 PCCAP05165 728 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 CHRM1P11229 460 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 CYP2C9P11712 490 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 C6P13671 934 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 GSPT1P15170 499 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 CTNNA2P26232 953 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 ARL1P40616 181 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 MAPK8P45983 427 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 SGCGQ13326 291 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 DHX8Q14562 1220 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 MDH1BQ5I0G3 518 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 TTC23LQ6PF05 361 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 PAQR7Q86WK9 346 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 TICAM2Q86XR7 235 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 GALNT15Q8N3T1 639 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 MIGA1Q8NAN2 632 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 TM9SF4Q92544 642 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 MAGEB10Q96LZ2 347 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 ZDHHC4Q9NPG8 344 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 NRBP1Q9UHY1 535 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 HPCAL4Q9UM19 191 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 MYO6Q9UM54 1294 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 MAGED2Q9UNF1 606 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 SEPT4O43236 478 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 ONECUT3O60422 494 aaPredicted RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 RAB11FIP3O75154 756 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 MCM4P33991 863 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 PLA2G5P39877 138 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 NUBP1P53384 320 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 ZRSR2Q15696 482 aaKnown RBP3.88□□□□□ -1.79
TOP2A-201ENST00000423485 SCN4BQ8IWT1 228 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 FBXL6Q8N531 539 aa3.88□□□□□ -1.79
TOP2A-201ENST00000423485 TAB3Q8N5C8 712 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms