RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 TAF1CQ15572 869 aaPredicted RBP23.1■■□□□ 1.29
GPC1-202ENST00000420138 VWA3BQ502W6 1294 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 CCDC62Q6P9F0 684 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 METTL7BQ6UX53 244 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 OTUD6AQ7L8S5 288 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 IFNL1Q8IU54 200 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 KSR1Q8IVT5 923 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 FBXO16Q8IX29 292 aaPredicted RBP23.1■■□□□ 1.29
GPC1-202ENST00000420138 UBE4BO95155 1302 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 RASSF10A6NK89 507 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 AKR1B15C9JRZ8 316 aaPredicted RBP23.1■■□□□ 1.29
GPC1-202ENST00000420138 GGPS1O95749 300 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 MAPTP10636 758 aaKnown RBP23.1■■□□□ 1.29
GPC1-202ENST00000420138 MAN2A1Q16706 1144 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 FAM110CQ1W6H9 321 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 CEP170P1Q96L14 293 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 PRIMPOLQ96LW4 560 aa23.1■■□□□ 1.29
GPC1-202ENST00000420138 LARSQ9P2J5 1176 aaKnown RBP23.1■■□□□ 1.29
GPC1-202ENST00000420138 ADGRA2Q96PE1 1338 aa23.09■■□□□ 1.29
GPC1-202ENST00000420138 MFAP3LO75121 409 aa23.09■■□□□ 1.29
GPC1-202ENST00000420138 NR2F2P24468 414 aa23.09■■□□□ 1.29
GPC1-202ENST00000420138 CASP14P31944 242 aa23.09■■□□□ 1.29
GPC1-202ENST00000420138 XKR3Q5GH77 459 aa23.09■■□□□ 1.29
GPC1-202ENST00000420138 TMEM63BQ5T3F8 832 aa23.09■■□□□ 1.29
GPC1-202ENST00000420138 CCDC43Q96MW1 224 aaKnown RBP23.09■■□□□ 1.29
GPC1-202ENST00000420138 NDST4Q9H3R1 872 aa23.09■■□□□ 1.29
GPC1-202ENST00000420138 ZNF302Q9NR11 478 aa23.09■■□□□ 1.29
GPC1-202ENST00000420138 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.09■■□□□ 1.29
GPC1-202ENST00000420138 ASB14A6NK59 587 aa23.08■■□□□ 1.29
GPC1-202ENST00000420138 STRNO43815 780 aa23.08■■□□□ 1.29
GPC1-202ENST00000420138 CALUO43852 315 aaPredicted RBP23.08■■□□□ 1.29
GPC1-202ENST00000420138 GNA14O95837 355 aa23.08■■□□□ 1.29
GPC1-202ENST00000420138 TBC1D8BQ0IIM8 1120 aa23.08■■□□□ 1.29
GPC1-202ENST00000420138 KCNV1Q6PIU1 500 aa23.08■■□□□ 1.29
GPC1-202ENST00000420138 GPR142Q7Z601 462 aa23.08■■□□□ 1.29
GPC1-202ENST00000420138 PPFIBP1Q86W92 1011 aa23.08■■□□□ 1.29
GPC1-202ENST00000420138 TRIM59Q8IWR1 403 aa23.08■■□□□ 1.29
GPC1-202ENST00000420138 CCDC112Q8NEF3 446 aa23.08■■□□□ 1.29
GPC1-202ENST00000420138 ERGIC2Q96RQ1 377 aa23.08■■□□□ 1.29
GPC1-202ENST00000420138 CYP26B1Q9NR63 512 aa23.08■■□□□ 1.29
GPC1-202ENST00000420138 PES1O00541 588 aaKnown RBP23.08■■□□□ 1.28
GPC1-202ENST00000420138 CETN3O15182 167 aa23.08■■□□□ 1.28
GPC1-202ENST00000420138 NFIL3Q16649 462 aa23.08■■□□□ 1.28
GPC1-202ENST00000420138 CELF3Q5SZQ8 465 aaKnown RBP23.08■■□□□ 1.28
GPC1-202ENST00000420138 CYP4F22Q6NT55 531 aa23.08■■□□□ 1.28
GPC1-202ENST00000420138 ARMCX2Q7L311 632 aa23.08■■□□□ 1.28
GPC1-202ENST00000420138 CPLX3Q8WVH0 158 aa23.08■■□□□ 1.28
GPC1-202ENST00000420138 DRC1Q96MC2 740 aa23.08■■□□□ 1.28
GPC1-202ENST00000420138 XPNPEP1Q9NQW7 623 aa23.08■■□□□ 1.28
GPC1-202ENST00000420138 PDGFCQ9NRA1 345 aa23.08■■□□□ 1.28
GPC1-202ENST00000420138 PCDHB13Q9Y5F0 798 aa23.08■■□□□ 1.28
GPC1-202ENST00000420138 MCM3APO60318 1980 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 NR3C1P04150 777 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 KCNJ6P48051 423 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 KLK7P49862 253 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 GRB14Q14449 540 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 SYCP1Q15431 976 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 PANX2Q96RD6 677 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 CEP89Q96ST8 783 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 TTYH3Q9C0H2 523 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 ST6GALNAC4Q9H4F1 302 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 KCND1Q9NSA2 647 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 SEPT9Q9UHD8 586 aaPredicted RBP23.07■■□□□ 1.28
GPC1-202ENST00000420138 CPA4Q9UI42 421 aa23.07■■□□□ 1.28
GPC1-202ENST00000420138 AKAP3O75969 853 aa23.06■■□□□ 1.28
GPC1-202ENST00000420138 OATP04181 439 aa23.06■■□□□ 1.28
GPC1-202ENST00000420138 HSDL1Q3SXM5 330 aa23.06■■□□□ 1.28
GPC1-202ENST00000420138 FAM102BQ5T8I3 360 aa23.06■■□□□ 1.28
GPC1-202ENST00000420138 E4F1Q66K89 784 aaPredicted RBP23.06■■□□□ 1.28
GPC1-202ENST00000420138 AFAP1L1Q8TED9 768 aa23.06■■□□□ 1.28
GPC1-202ENST00000420138 SEPT1Q8WYJ6 367 aa23.06■■□□□ 1.28
GPC1-202ENST00000420138 GPR20Q99678 358 aa23.06■■□□□ 1.28
GPC1-202ENST00000420138 IVNS1ABPQ9Y6Y0 642 aa23.06■■□□□ 1.28
GPC1-202ENST00000420138 UQCRHLA0A096LP55 91 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 USP27XA6NNY8 438 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 K7ENM7 598 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 NRDCO43847 1150 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 DGAT1O75907 488 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 UQCRHP07919 91 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 NCKAP1LP55160 1127 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 SOX10P56693 466 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 TRIM14Q14142 442 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 CCDC40Q4G0X9 1142 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 STXBP4Q6ZWJ1 553 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 ZNF467Q7Z7K2 595 aaPredicted RBP23.05■■□□□ 1.28
GPC1-202ENST00000420138 ZIC5Q96T25 663 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 BAG1Q99933 345 aaPredicted RBP23.05■■□□□ 1.28
GPC1-202ENST00000420138 MLXIPQ9HAP2 919 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 SIK3Q9Y2K2 1263 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 CLIC2O15247 247 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 FECHP22830 423 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 TCF7P36402 384 aaPredicted RBP23.05■■□□□ 1.28
GPC1-202ENST00000420138 PEX3P56589 373 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 GTF2BQ00403 316 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 TAPT1Q6NXT6 567 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 BSNDQ8WZ55 320 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 COPS5Q92905 334 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 NIFKQ9BYG3 293 aaKnown RBP23.05■■□□□ 1.28
GPC1-202ENST00000420138 KATNBL1Q9H079 304 aa23.05■■□□□ 1.28
GPC1-202ENST00000420138 AGPAT3Q9NRZ7 376 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms