RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 DKC1O60832 514 aaKnown RBP eCLIP18.74■□□□□ 0.59
CALD1-204ENST00000417172 LRMPQ12912 555 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 ZNF720Q7Z2F6 126 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 XPNPEP1Q9NQW7 623 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 CA12O43570 354 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 CYP2B6P20813 491 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 PEX3P56589 373 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 GOLGA8FQ08AF8 430 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 GOLGA8DPQ0D2H9 430 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 KNOP1Q1ED39 458 aaKnown RBP18.74■□□□□ 0.59
CALD1-204ENST00000417172 ZNF784Q8NCA9 323 aaPredicted RBP18.74■□□□□ 0.59
CALD1-204ENST00000417172 ZNF507Q8TCN5 953 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 BSNDQ8WZ55 320 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 CAPNS2Q96L46 248 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 TSG101Q99816 390 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 KIFC3Q9BVG8 833 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 RTN4Q9NQC3 1192 aaKnown RBP18.74■□□□□ 0.59
CALD1-204ENST00000417172 SEL1LQ9UBV2 794 aa18.74■□□□□ 0.59
CALD1-204ENST00000417172 GOLGA6L6A8MZA4 724 aa18.73■□□□□ 0.59
CALD1-204ENST00000417172 K7ENM7 598 aa18.73■□□□□ 0.59
CALD1-204ENST00000417172 PLS3P13797 630 aa18.73■□□□□ 0.59
CALD1-204ENST00000417172 SPAG1Q07617 926 aa18.73■□□□□ 0.59
CALD1-204ENST00000417172 BMT2Q1RMZ1 405 aa18.73■□□□□ 0.59
CALD1-204ENST00000417172 NOC3LQ8WTT2 800 aaKnown RBP18.73■□□□□ 0.59
CALD1-204ENST00000417172 GLG1Q92896 1179 aa18.73■□□□□ 0.59
CALD1-204ENST00000417172 PDLIM7Q9NR12 457 aa18.73■□□□□ 0.59
CALD1-204ENST00000417172 MAGEC2Q9UBF1 373 aaPredicted RBP18.73■□□□□ 0.59
CALD1-204ENST00000417172 RBM47A0AV96 593 aaKnown RBP18.72■□□□□ 0.59
CALD1-204ENST00000417172 LRRC10BA6NIK2 292 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 TNPO2O14787 897 aaKnown RBP18.72■□□□□ 0.59
CALD1-204ENST00000417172 N4BP3O15049 544 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 SMPD1P17405 629 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 EEF1GP26641 437 aaKnown RBP18.72■□□□□ 0.59
CALD1-204ENST00000417172 CYP2C19P33261 490 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 ACVR2BQ13705 512 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 DEFB115Q30KQ5 88 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 HS1BP3Q53T59 392 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 FAM160B1Q5W0V3 765 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 AFAP1L1Q8TED9 768 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 CACTINQ8WUQ7 758 aaKnown RBP18.72■□□□□ 0.59
CALD1-204ENST00000417172 USP6NLQ92738 828 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 CEP89Q96ST8 783 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 GJD2Q9UKL4 321 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 CLIC2O15247 247 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 EIF3DO15371 548 aaKnown RBP eCLIP18.72■□□□□ 0.59
CALD1-204ENST00000417172 SLC16A4O15374 487 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 TGFB1I1O43294 461 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 LGR5O75473 907 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 PPP1R37O75864 691 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 CAP1Q01518 475 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 LENG1Q96BZ8 264 aaPredicted RBP18.72■□□□□ 0.59
CALD1-204ENST00000417172 DRC1Q96MC2 740 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 CTAGE1Q96RT6 745 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 TUBGCP2Q9BSJ2 902 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 AZI2Q9H6S1 392 aa18.72■□□□□ 0.59
CALD1-204ENST00000417172 LARSQ9P2J5 1176 aaKnown RBP18.72■□□□□ 0.59
CALD1-204ENST00000417172 PES1O00541 588 aaKnown RBP18.71■□□□□ 0.59
CALD1-204ENST00000417172 KIF20AO95235 890 aa18.71■□□□□ 0.59
CALD1-204ENST00000417172 MTIF2P46199 727 aaKnown RBP18.71■□□□□ 0.59
CALD1-204ENST00000417172 HTRA3P83110 453 aa18.71■□□□□ 0.59
CALD1-204ENST00000417172 NOGQ13253 232 aa18.71■□□□□ 0.59
CALD1-204ENST00000417172 EMC2Q15006 297 aa18.71■□□□□ 0.59
CALD1-204ENST00000417172 CEP135Q66GS9 1140 aa18.71■□□□□ 0.59
CALD1-204ENST00000417172 AFG1LQ8WV93 481 aa18.71■□□□□ 0.59
CALD1-204ENST00000417172 TMEM143Q96AN5 459 aa18.71■□□□□ 0.59
CALD1-204ENST00000417172 STRA6Q9BX79 667 aa18.71■□□□□ 0.59
CALD1-204ENST00000417172 ABHD16BQ9H3Z7 469 aa18.71■□□□□ 0.59
CALD1-204ENST00000417172 ATP6V0A4Q9HBG4 840 aa18.71■□□□□ 0.59
CALD1-204ENST00000417172 HTTP42858 3142 aa18.71■□□□□ 0.59
CALD1-204ENST00000417172 TISP43B9A030 160 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 DGAT1O75907 488 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 GH1P01241 217 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 TPM3P06753 285 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 NR2F2P24468 414 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 PBX1P40424 430 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 POLGP54098 1239 aaPredicted RBP18.7■□□□□ 0.58
CALD1-204ENST00000417172 FKBP3Q00688 224 aaKnown RBP18.7■□□□□ 0.58
CALD1-204ENST00000417172 MIIPQ5JXC2 388 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 ARMCX5Q6P1M9 558 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 ANKRD20A12PQ8NF67 263 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 NIFKQ9BYG3 293 aaKnown RBP18.7■□□□□ 0.58
CALD1-204ENST00000417172 POLR3FQ9H1D9 316 aaPredicted RBP18.7■□□□□ 0.58
CALD1-204ENST00000417172 EVPLQ92817 2033 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 EMSYQ7Z589 1322 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 ADGRA3Q8IWK6 1321 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 RASSF10A6NK89 507 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 TBC1D8O95759 1140 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 ZNF286BP0CG31 522 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 YY1P25490 414 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 NPTX2P47972 431 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 TARBP2Q15633 366 aaKnown RBP18.7■□□□□ 0.58
CALD1-204ENST00000417172 FILIP1LQ4L180 1135 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 FAM114A1Q8IWE2 563 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 TRAPPC12Q8WVT3 735 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 ZBTB10Q96DT7 871 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 TIPINQ9BVW5 301 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 CREBZFQ9NS37 354 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 TYW1Q9NV66 732 aaKnown RBP18.7■□□□□ 0.58
CALD1-204ENST00000417172 SLC5A4Q9NY91 659 aa18.7■□□□□ 0.58
CALD1-204ENST00000417172 TRAF3IP3Q9Y228 551 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms