RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 GBF1Q92538 1859 aa6.81□□□□□ -1.32
CSTF1-202ENST00000415828 VAMP4O75379 141 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 NAT2P11245 290 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 ATP2B1P20020 1258 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 NOP2P46087 812 aaKnown RBP6.8□□□□□ -1.32
CSTF1-202ENST00000415828 EIF5P55010 431 aaKnown RBP6.8□□□□□ -1.32
CSTF1-202ENST00000415828 FKBP1BP68106 108 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 POU4F1Q01851 419 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 DPY19L1Q2PZI1 675 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 CEP128Q6ZU80 1094 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 ZNF605Q86T29 641 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 IRF2BP1Q8IU81 584 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 SIRT2Q8IXJ6 389 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 MICAL1Q8TDZ2 1067 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 U2AF1L4Q8WU68 220 aaKnown RBP6.8□□□□□ -1.32
CSTF1-202ENST00000415828 PPM1EQ8WY54 764 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 INTS4Q96HW7 963 aaKnown RBP6.8□□□□□ -1.32
CSTF1-202ENST00000415828 PAWRQ96IZ0 340 aaKnown RBP6.8□□□□□ -1.32
CSTF1-202ENST00000415828 MAP6Q96JE9 813 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 FCRL2Q96LA5 508 aaPredicted RBP6.8□□□□□ -1.32
CSTF1-202ENST00000415828 APBA2Q99767 749 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 SLC12A9Q9BXP2 914 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 CD320Q9NPF0 282 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 APEX2Q9UBZ4 518 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 SUSD2Q9UGT4 822 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 USP24Q9UPU5 2620 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 AKT3Q9Y243 479 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 DIS3Q9Y2L1 958 aaKnown RBP6.8□□□□□ -1.32
CSTF1-202ENST00000415828 GPR179Q6PRD1 2367 aa6.8□□□□□ -1.32
CSTF1-202ENST00000415828 ACACBO00763 2458 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 A0A087WZG4 1122 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 TCAF2A6NFQ2 919 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 SMIM22K7EJ46 135 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 MED14OSP0DP75 135 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 ENDOUP21128 410 aaKnown RBP6.79□□□□□ -1.32
CSTF1-202ENST00000415828 GLDCP23378 1020 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 PRKG1Q13976 671 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 SNX17Q15036 470 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 KCNA10Q16322 511 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 LCNL1Q6ZST4 164 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 ATXN2LQ8WWM7 1075 aaKnown RBP6.79□□□□□ -1.32
CSTF1-202ENST00000415828 PTPN18Q99952 460 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 CGGBP1Q9UFW8 167 aaPredicted RBP6.79□□□□□ -1.32
CSTF1-202ENST00000415828 RALYQ9UKM9 306 aaKnown RBP6.79□□□□□ -1.32
CSTF1-202ENST00000415828 SMG5Q9UPR3 1016 aaKnown RBP6.79□□□□□ -1.32
CSTF1-202ENST00000415828 PTPRZ1P23471 2315 aaPredicted RBP6.79□□□□□ -1.32
CSTF1-202ENST00000415828 ASPMQ8IZT6 3477 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 KIF24Q5T7B8 1368 aa6.79□□□□□ -1.32
CSTF1-202ENST00000415828 DUOX1Q9NRD9 1551 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 FRYLO94915 3013 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 MAST2Q6P0Q8 1798 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 FLNBO75369 2602 aaKnown RBP6.78□□□□□ -1.32
CSTF1-202ENST00000415828 NOTOA8MTQ0 251 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 PSMD14O00487 310 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 EFEMP2O95967 443 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 ZSCAN22P10073 491 aaPredicted RBP6.78□□□□□ -1.32
CSTF1-202ENST00000415828 IFNGR1P15260 489 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 ALDH1B1P30837 517 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 GTF2F1P35269 517 aaKnown RBP eCLIP6.78□□□□□ -1.32
CSTF1-202ENST00000415828 SV2CQ496J9 727 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 RTP2Q5QGT7 225 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 LCE4AQ5TA78 99 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 CELF2-AS1Q8N7Q2 184 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 FCRL3Q96P31 734 aaPredicted RBP6.78□□□□□ -1.32
CSTF1-202ENST00000415828 TRIM55Q9BYV6 548 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 SLC12A5Q9H2X9 1139 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 LRP2BPQ9P2M1 347 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 GPR55Q9Y2T6 319 aaPredicted RBP6.78□□□□□ -1.32
CSTF1-202ENST00000415828 PLXNA3P51805 1871 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 NCOR2Q9Y618 2525 aa6.78□□□□□ -1.32
CSTF1-202ENST00000415828 LOC105371045A0A1W2PR82 267 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 STXBP3O00186 592 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 NOP56O00567 594 aaKnown RBP6.77□□□□□ -1.33
CSTF1-202ENST00000415828 KCNH1O95259 989 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 GJB6O95452 261 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 SGPL1O95470 568 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 CTGFP29279 349 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 KIR2DL1P43626 348 aaPredicted RBP6.77□□□□□ -1.33
CSTF1-202ENST00000415828 KIR2DL2P43627 348 aaPredicted RBP6.77□□□□□ -1.33
CSTF1-202ENST00000415828 MRPS5P82675 430 aaKnown RBP6.77□□□□□ -1.33
CSTF1-202ENST00000415828 AMPD2Q01433 879 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 SLC39A6Q13433 755 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 TNIP1Q15025 636 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 NBPF5PQ86XG9 351 aaPredicted RBP6.77□□□□□ -1.33
CSTF1-202ENST00000415828 CKAP2LQ8IYA6 745 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 ARHGEF39Q8N4T4 335 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 ANKS1AQ92625 1134 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 COG3Q96JB2 828 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 LGR4Q9BXB1 951 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 ERVK13-1Q9NX77 482 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 THEGQ9P2T0 379 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 TNFRSF10DQ9UBN6 386 aa6.77□□□□□ -1.33
CSTF1-202ENST00000415828 KIF7Q2M1P5 1343 aa6.76□□□□□ -1.33
CSTF1-202ENST00000415828 RIF1Q5UIP0 2472 aaKnown RBP6.76□□□□□ -1.33
CSTF1-202ENST00000415828 NAV2Q8IVL1 2488 aa6.76□□□□□ -1.33
CSTF1-202ENST00000415828 MYOCOSA0A1B0GUC4 107 aa6.76□□□□□ -1.33
CSTF1-202ENST00000415828 MANSC4A6NHS7 340 aaPredicted RBP6.76□□□□□ -1.33
CSTF1-202ENST00000415828 CAMTA2O94983 1202 aa6.76□□□□□ -1.33
CSTF1-202ENST00000415828 ZNF143P52747 638 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms