RNA–Protein interactions for RNA: ENST00000414861.6

RIF1-202, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-202ENST00000414861 ZNF131P52739 623 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 PRMT2P55345 433 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 FAM26FQ5R3K3 315 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 LUZP1Q86V48 1076 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 CCDC65Q8IXS2 484 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 KAT2BQ92831 832 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 MED15Q96RN5 788 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 TUT1Q9H6E5 874 aaKnown RBP10.74□□□□□ -0.69
RIF1-202ENST00000414861 CBX8Q9HC52 389 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 PDLIM7Q9NR12 457 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 ODF2LQ9ULJ1 636 aa10.74□□□□□ -0.69
RIF1-202ENST00000414861 ADAMTS4O75173 837 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 FAM13AO94988 1023 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 RARBP10826 455 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 HSPA8P11142 646 aaKnown RBP10.73□□□□□ -0.69
RIF1-202ENST00000414861 CPT1AP50416 773 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 GJA9P57773 515 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 EMC2Q15006 297 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 LRRC41Q15345 812 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 HERC4Q5GLZ8 1057 aaPredicted RBP10.73□□□□□ -0.69
RIF1-202ENST00000414861 KLHL10Q6JEL2 608 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 MLKLQ8NB16 471 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 FAM200AQ8TCP9 573 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 FIZ1Q96SL8 496 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 UPF3AQ9H1J1 476 aaKnown RBP10.73□□□□□ -0.69
RIF1-202ENST00000414861 DHX33Q9H6R0 707 aaKnown RBP10.73□□□□□ -0.69
RIF1-202ENST00000414861 PTPN22Q9Y2R2 807 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 DGAT1O75907 488 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 IQCB1Q15051 598 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 FAM102BQ5T8I3 360 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 DHX40Q8IX18 779 aaKnown RBP10.73□□□□□ -0.69
RIF1-202ENST00000414861 BSNDQ8WZ55 320 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 CCDC47Q96A33 483 aaKnown RBP10.73□□□□□ -0.69
RIF1-202ENST00000414861 ATP6V0A4Q9HBG4 840 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 PARVGQ9HBI0 331 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 XPNPEP3Q9NQH7 507 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 NRBP2Q9NSY0 501 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 ZNF215Q9UL58 517 aaPredicted RBP10.73□□□□□ -0.69
RIF1-202ENST00000414861 COL4A3BPQ9Y5P4 624 aa10.73□□□□□ -0.69
RIF1-202ENST00000414861 HBP1O60381 514 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 MYL3P08590 195 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 INSRRP14616 1297 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 POLGP54098 1239 aaPredicted RBP10.72□□□□□ -0.69
RIF1-202ENST00000414861 PURAQ00577 322 aaKnown RBP10.72□□□□□ -0.69
RIF1-202ENST00000414861 DRP2Q13474 957 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 ADSSL1Q8N142 457 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 MYCT1Q8N699 235 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 AOPEPQ8N6M6 819 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 DDX20Q9UHI6 824 aaKnown RBP10.72□□□□□ -0.69
RIF1-202ENST00000414861 CTNND2Q9UQB3 1225 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 GOLGA6L3A6NEY3 463 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 MYBP10242 640 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 CHMP4BP1P59074 171 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 IGBP1P78318 339 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 GNASQ5JWF2 1037 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 TMEM143Q96AN5 459 aa10.72□□□□□ -0.69
RIF1-202ENST00000414861 TRIM49BA6NDI0 452 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 GAP43P17677 238 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 NMT1P30419 496 aaKnown RBP10.71□□□□□ -0.69
RIF1-202ENST00000414861 PMS1P54277 932 aaKnown RBP10.71□□□□□ -0.69
RIF1-202ENST00000414861 STX17P56962 302 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 NKX3-2P78367 333 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 TBC1D8BQ0IIM8 1120 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 NCAPHQ15003 741 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 KIAA0753Q2KHM9 967 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 ODR4Q5SWX8 454 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 LRRC71Q8N4P6 559 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 MCPH1Q8NEM0 835 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 SCFD1Q8WVM8 642 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 SLC7A3Q8WY07 619 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 BPIFA3Q9BQP9 254 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 KIFC3Q9BVG8 833 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 POLR3FQ9H1D9 316 aaPredicted RBP10.71□□□□□ -0.69
RIF1-202ENST00000414861 OLFML3Q9NRN5 406 aa10.71□□□□□ -0.69
RIF1-202ENST00000414861 HAS3O00219 553 aa10.71□□□□□ -0.7
RIF1-202ENST00000414861 MAFO75444 373 aaPredicted RBP10.71□□□□□ -0.7
RIF1-202ENST00000414861 C22orf31O95567 290 aa10.71□□□□□ -0.7
RIF1-202ENST00000414861 MYCP01106 439 aaPredicted RBP10.71□□□□□ -0.7
RIF1-202ENST00000414861 MYCNP04198 464 aaPredicted RBP10.71□□□□□ -0.7
RIF1-202ENST00000414861 HSPA1AP0DMV8 641 aaKnown RBP10.71□□□□□ -0.7
RIF1-202ENST00000414861 HSPA1BP0DMV9 641 aaKnown RBP10.71□□□□□ -0.7
RIF1-202ENST00000414861 PLS3P13797 630 aa10.71□□□□□ -0.7
RIF1-202ENST00000414861 RFC5P40937 340 aa10.71□□□□□ -0.7
RIF1-202ENST00000414861 PSMD2Q13200 908 aa10.71□□□□□ -0.7
RIF1-202ENST00000414861 MKRN4PQ13434 485 aaPredicted RBP10.71□□□□□ -0.7
RIF1-202ENST00000414861 MFSD10Q14728 455 aa10.71□□□□□ -0.7
RIF1-202ENST00000414861 CXCL17Q6UXB2 119 aa10.71□□□□□ -0.7
RIF1-202ENST00000414861 DRC1Q96MC2 740 aa10.71□□□□□ -0.7
RIF1-202ENST00000414861 TIPINQ9BVW5 301 aa10.71□□□□□ -0.7
RIF1-202ENST00000414861 NAT10Q9H0A0 1025 aaKnown RBP10.71□□□□□ -0.7
RIF1-202ENST00000414861 MRPL44Q9H9J2 332 aaKnown RBP10.71□□□□□ -0.7
RIF1-202ENST00000414861 IGKV6-21A0A0C4DH24 114 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 CAVIN2O95810 425 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 SMIM10L2AP0DMW4 78 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 SMIM10L2BP0DMW5 78 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 HOXD13P35453 343 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 PSEN2P49810 448 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 LBX1P52954 281 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 PEX3P56589 373 aa10.7□□□□□ -0.7
RIF1-202ENST00000414861 KCNA1Q09470 495 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms