RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 POTEMA6NI47 508 aa16.43■□□□□ 0.22
CHD1-202ENST00000414220 RPS6KA5O75582 802 aa16.43■□□□□ 0.22
CHD1-202ENST00000414220 SYT1P21579 422 aa16.43■□□□□ 0.22
CHD1-202ENST00000414220 TOB1P50616 345 aaPredicted RBP16.43■□□□□ 0.22
CHD1-202ENST00000414220 CLCN3P51790 818 aa16.43■□□□□ 0.22
CHD1-202ENST00000414220 NFX1Q12986 1120 aaKnown RBP16.43■□□□□ 0.22
CHD1-202ENST00000414220 LPIN1Q14693 890 aa16.43■□□□□ 0.22
CHD1-202ENST00000414220 ANO5Q75V66 913 aa16.43■□□□□ 0.22
CHD1-202ENST00000414220 HERC6Q8IVU3 1022 aa16.43■□□□□ 0.22
CHD1-202ENST00000414220 DEFB123Q8N688 67 aa16.43■□□□□ 0.22
CHD1-202ENST00000414220 NACC1Q96RE7 527 aa16.43■□□□□ 0.22
CHD1-202ENST00000414220 POLR3CQ9BUI4 534 aaPredicted RBP16.43■□□□□ 0.22
CHD1-202ENST00000414220 PBX4Q9BYU1 374 aa16.43■□□□□ 0.22
CHD1-202ENST00000414220 INO80BQ9C086 356 aaPredicted RBP16.43■□□□□ 0.22
CHD1-202ENST00000414220 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.43■□□□□ 0.22
CHD1-202ENST00000414220 TANC1Q9C0D5 1861 aa16.43■□□□□ 0.22
CHD1-202ENST00000414220 GRXCR1A8MXD5 290 aa16.42■□□□□ 0.22
CHD1-202ENST00000414220 TLL1O43897 1013 aa16.42■□□□□ 0.22
CHD1-202ENST00000414220 STBD1O95210 358 aa16.42■□□□□ 0.22
CHD1-202ENST00000414220 VTNP04004 478 aa16.42■□□□□ 0.22
CHD1-202ENST00000414220 RPA1P27694 616 aa16.42■□□□□ 0.22
CHD1-202ENST00000414220 NLRP11P59045 1033 aaKnown RBP16.42■□□□□ 0.22
CHD1-202ENST00000414220 NBR1Q14596 966 aa16.42■□□□□ 0.22
CHD1-202ENST00000414220 KRT79Q5XKE5 535 aa16.42■□□□□ 0.22
CHD1-202ENST00000414220 PLA2G4FQ68DD2 849 aa16.42■□□□□ 0.22
CHD1-202ENST00000414220 MYOCDQ8IZQ8 938 aa16.42■□□□□ 0.22
CHD1-202ENST00000414220 NLRP7Q8WX94 980 aa16.42■□□□□ 0.22
CHD1-202ENST00000414220 GCOM2Q9BZD3 368 aaPredicted RBP16.42■□□□□ 0.22
CHD1-202ENST00000414220 ZSCAN16Q9H4T2 348 aaPredicted RBP16.42■□□□□ 0.22
CHD1-202ENST00000414220 IGKV6-21A0A0C4DH24 114 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 ASAP2O43150 1006 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 STX6O43752 255 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 DGAT1O75907 488 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 CD52P31358 61 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 NPEPPSP55786 919 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 KIZQ2M2Z5 673 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 ARL6IP4Q66PJ3 421 aaKnown RBP16.41■□□□□ 0.22
CHD1-202ENST00000414220 FERMT3Q86UX7 667 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 C4orf32Q8N8J7 132 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 MTRQ99707 1265 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 SH2D3AQ9BRG2 576 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 SUCLA2Q9P2R7 463 aaPredicted RBP16.41■□□□□ 0.22
CHD1-202ENST00000414220 PADI3Q9ULW8 664 aa16.41■□□□□ 0.22
CHD1-202ENST00000414220 TMEM150BA6NC51 233 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 ZSCAN20P17040 1043 aaPredicted RBP16.4■□□□□ 0.22
CHD1-202ENST00000414220 EIF4BP23588 611 aaKnown RBP16.4■□□□□ 0.22
CHD1-202ENST00000414220 CCT6AP40227 531 aaKnown RBP16.4■□□□□ 0.22
CHD1-202ENST00000414220 GPC3P51654 580 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 ATP2C1P98194 919 aaPredicted RBP16.4■□□□□ 0.22
CHD1-202ENST00000414220 ZNF410Q86VK4 478 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 CATSPER3Q86XQ3 398 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 RHPN2Q8IUC4 686 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 LINC01465Q8N7H1 131 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 PSPC1Q8WXF1 523 aaKnown RBP16.4■□□□□ 0.22
CHD1-202ENST00000414220 PPP1R16BQ96T49 567 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 RAD9AQ99638 391 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 OSMRQ99650 979 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 SEMA6BQ9H3T3 888 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 ZNF576Q9H609 170 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 ATP6V0A4Q9HBG4 840 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 INSL6Q9Y581 213 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 SCN5AQ14524 2016 aa16.4■□□□□ 0.22
CHD1-202ENST00000414220 DENND3A2RUS2 1198 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 GPR32O75388 356 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 GJB5O95377 273 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 STAG3L1P0CL83 205 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 PBX2P40425 430 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 RABGGTBP53611 331 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 TFDP1Q14186 410 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 BECN1Q14457 450 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 MXD4Q14582 209 aaPredicted RBP16.39■□□□□ 0.21
CHD1-202ENST00000414220 PPP2R2DQ66LE6 453 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHD1-202ENST00000414220 KCTD17Q8N5Z5 321 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 IGSF22Q8N9C0 903 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 SNX29Q8TEQ0 813 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 TOP1MTQ969P6 601 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 CDK5RAP3Q96JB5 506 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 NKX2-4Q9H2Z4 354 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 DHX33Q9H6R0 707 aaKnown RBP16.39■□□□□ 0.21
CHD1-202ENST00000414220 AGO3Q9H9G7 860 aaKnown RBP16.39■□□□□ 0.21
CHD1-202ENST00000414220 WRAP73Q9P2S5 460 aaPredicted RBP16.39■□□□□ 0.21
CHD1-202ENST00000414220 DBR1Q9UK59 544 aaKnown RBP16.39■□□□□ 0.21
CHD1-202ENST00000414220 ST3GAL5Q9UNP4 418 aa16.39■□□□□ 0.21
CHD1-202ENST00000414220 NOC2LQ9Y3T9 749 aaKnown RBP16.39■□□□□ 0.21
CHD1-202ENST00000414220 ARHGEF35A5YM69 484 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 ENPP3O14638 875 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 MED24O75448 989 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 UPP2O95045 317 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 SFPQP23246 707 aaKnown RBP eCLIP16.38■□□□□ 0.21
CHD1-202ENST00000414220 RARRES1P49788 294 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 DEFB103AP81534 67 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 EMC2Q15006 297 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 PIGOQ8TEQ8 1089 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 AK8Q96MA6 479 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 CEP89Q96ST8 783 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 C1orf112Q9NSG2 853 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 LRFN2Q9ULH4 789 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 DNM3Q9UQ16 869 aa16.38■□□□□ 0.21
CHD1-202ENST00000414220 COL4A3BPQ9Y5P4 624 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms