RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 TBC1D8BQ0IIM8 1120 aa16.93■□□□□ 0.3
LSM5-207ENST00000410044 TPRNQ4KMQ1 711 aa16.93■□□□□ 0.3
LSM5-207ENST00000410044 ARSHQ5FYA8 562 aa16.93■□□□□ 0.3
LSM5-207ENST00000410044 GDF6Q6KF10 455 aaPredicted RBP16.93■□□□□ 0.3
LSM5-207ENST00000410044 CEP57L1Q8IYX8 460 aa16.93■□□□□ 0.3
LSM5-207ENST00000410044 GPT2Q8TD30 523 aa16.93■□□□□ 0.3
LSM5-207ENST00000410044 TOX2Q96NM4 488 aa16.93■□□□□ 0.3
LSM5-207ENST00000410044 SH2D3AQ9BRG2 576 aa16.93■□□□□ 0.3
LSM5-207ENST00000410044 SMIM35A0A1B0GVV1 85 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 MBD3O95983 291 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 CD4P01730 458 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 MYL1P05976 194 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 MDM2Q00987 491 aaPredicted RBP16.92■□□□□ 0.3
LSM5-207ENST00000410044 ANKRD33Q7Z3H0 272 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 RPAINQ86UA6 219 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 TNS4Q8IZW8 715 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 CNNM3Q8NE01 707 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 MCPH1Q8NEM0 835 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 TRAPPC12Q8WVT3 735 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 SLC7A3Q8WY07 619 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 PAGE5Q96GU1 130 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 CCDC43Q96MW1 224 aaKnown RBP16.92■□□□□ 0.3
LSM5-207ENST00000410044 CTAGE1Q96RT6 745 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 C7orf25Q9BPX7 421 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 XPNPEP1Q9NQW7 623 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 DACT1Q9NYF0 836 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 MROH7Q68CQ1 1323 aa16.92■□□□□ 0.3
LSM5-207ENST00000410044 MYMKA6NI61 221 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 TREHO43280 583 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 RPLP2P05387 115 aaKnown RBP16.91■□□□□ 0.3
LSM5-207ENST00000410044 POLGP54098 1239 aaPredicted RBP16.91■□□□□ 0.3
LSM5-207ENST00000410044 CHMP4BP1P59074 171 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 IGBP1P78318 339 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 ZNF200P98182 395 aaPredicted RBP16.91■□□□□ 0.3
LSM5-207ENST00000410044 FAM47CQ5HY64 1035 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 IER5Q5VY09 327 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 EFCAB12Q6NXP0 572 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 SERINC5Q86VE9 423 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 GPBP1Q86WP2 473 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 FAM126BQ8IXS8 530 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 RETREG2Q8NC44 543 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 PPP1R13LQ8WUF5 828 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 DNAJC19Q96DA6 116 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 CCDC34Q96HJ3 373 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 RUSC1Q9BVN2 902 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 ATP6V0A4Q9HBG4 840 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 TUBE1Q9UJT0 475 aa16.91■□□□□ 0.3
LSM5-207ENST00000410044 KINO60870 393 aaKnown RBP16.9■□□□□ 0.3
LSM5-207ENST00000410044 SSBP05455 408 aaKnown RBP eCLIP16.9■□□□□ 0.3
LSM5-207ENST00000410044 ARL2P36404 184 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 RTP1P59025 263 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 PTK7Q13308 1070 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 MKRN4PQ13434 485 aaPredicted RBP16.9■□□□□ 0.3
LSM5-207ENST00000410044 GIT2Q14161 759 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 EMC2Q15006 297 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 NFKBIBQ15653 356 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 PTGISQ16647 500 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 TAF2Q6P1X5 1199 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 KIAA0319LQ8IZA0 1049 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 ZNF710Q8N1W2 664 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 NME8Q8N427 588 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 TCP11Q8WWU5 503 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 DDX12PQ92771 950 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 TRIM9Q9C026 710 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 BMP2KQ9NSY1 1161 aaPredicted RBP16.9■□□□□ 0.3
LSM5-207ENST00000410044 ODF2LQ9ULJ1 636 aa16.9■□□□□ 0.3
LSM5-207ENST00000410044 ASAP2O43150 1006 aa16.89■□□□□ 0.29
LSM5-207ENST00000410044 GTPBP6O43824 516 aaPredicted RBP16.89■□□□□ 0.29
LSM5-207ENST00000410044 B4GALT4O60513 344 aa16.89■□□□□ 0.29
LSM5-207ENST00000410044 USO1O60763 962 aaKnown RBP16.89■□□□□ 0.29
LSM5-207ENST00000410044 CYP2C9P11712 490 aa16.89■□□□□ 0.29
LSM5-207ENST00000410044 TMOD1P28289 359 aa16.89■□□□□ 0.29
LSM5-207ENST00000410044 DNM2P50570 870 aa16.89■□□□□ 0.29
LSM5-207ENST00000410044 CDC42EP1Q00587 391 aa16.89■□□□□ 0.29
LSM5-207ENST00000410044 MAPK7Q13164 816 aa16.89■□□□□ 0.29
LSM5-207ENST00000410044 DHX8Q14562 1220 aaKnown RBP16.89■□□□□ 0.29
LSM5-207ENST00000410044 DAW1Q8N136 415 aa16.89■□□□□ 0.29
LSM5-207ENST00000410044 STAMQ92783 540 aa16.89■□□□□ 0.29
LSM5-207ENST00000410044 C17orf75Q9HAS0 396 aa16.89■□□□□ 0.29
LSM5-207ENST00000410044 MYH11P35749 1972 aa16.89■□□□□ 0.29
LSM5-207ENST00000410044 PVALEFA0A1B0GWK0 134 aa16.88■□□□□ 0.29
LSM5-207ENST00000410044 FRMD3A2A2Y4 597 aa16.88■□□□□ 0.29
LSM5-207ENST00000410044 AFMP43652 599 aa16.88■□□□□ 0.29
LSM5-207ENST00000410044 ZNF131P52739 623 aa16.88■□□□□ 0.29
LSM5-207ENST00000410044 POU5F1BQ06416 359 aa16.88■□□□□ 0.29
LSM5-207ENST00000410044 RBL2Q08999 1139 aa16.88■□□□□ 0.29
LSM5-207ENST00000410044 DPYDQ12882 1025 aa16.88■□□□□ 0.29
LSM5-207ENST00000410044 TRIM71Q2Q1W2 868 aaKnown RBP16.88■□□□□ 0.29
LSM5-207ENST00000410044 SKOR2Q2VWA4 1001 aaPredicted RBP16.88■□□□□ 0.29
LSM5-207ENST00000410044 KIFAP3Q92845 792 aa16.88■□□□□ 0.29
LSM5-207ENST00000410044 NTPCRQ9BSD7 190 aaKnown RBP16.88■□□□□ 0.29
LSM5-207ENST00000410044 TRPV6Q9H1D0 765 aa16.88■□□□□ 0.29
LSM5-207ENST00000410044 SUGCTQ9HAC7 445 aa16.88■□□□□ 0.29
LSM5-207ENST00000410044 TRMT13Q9NUP7 481 aaKnown RBP16.88■□□□□ 0.29
LSM5-207ENST00000410044 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
LSM5-207ENST00000410044 HOOK1Q9UJC3 728 aaKnown RBP16.88■□□□□ 0.29
LSM5-207ENST00000410044 BRCA2P51587 3418 aa16.87■□□□□ 0.29
LSM5-207ENST00000410044 CCDC85CA6NKD9 419 aa16.87■□□□□ 0.29
LSM5-207ENST00000410044 DCDC2CA8MYV0 355 aa16.87■□□□□ 0.29
LSM5-207ENST00000410044 TLR3O15455 904 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms