RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 EXOC1Q9NV70 894 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 TBCAO75347 108 aaKnown RBP13.96□□□□□ -0.17
PMS1-204ENST00000409823 GJB1P08034 283 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 CCDC192P0DO97 292 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 SLC26A2P50443 739 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 TBC1D8BQ0IIM8 1120 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 COASYQ13057 564 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 MFSD10Q14728 455 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 ANO6Q4KMQ2 910 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 LRSAM1Q6UWE0 723 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 C11orf57Q6ZUT1 292 aaPredicted RBP13.96□□□□□ -0.17
PMS1-204ENST00000409823 MYCT1Q8N699 235 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 RNF214Q8ND24 703 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 SLC7A3Q8WY07 619 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 FUCA2Q9BTY2 467 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 LRRC27Q9C0I9 530 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 XPNPEP1Q9NQW7 623 aa13.96□□□□□ -0.17
PMS1-204ENST00000409823 ZNF200P98182 395 aaPredicted RBP13.95□□□□□ -0.18
PMS1-204ENST00000409823 PPFIA1Q13136 1202 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 EMC2Q15006 297 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 TARBP2Q15633 366 aaKnown RBP13.95□□□□□ -0.18
PMS1-204ENST00000409823 KLHL10Q6JEL2 608 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 UNC13DQ70J99 1090 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 SFR1Q86XK3 245 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 KCTD17Q8N5Z5 321 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 FAM167AQ96KS9 214 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 CEP89Q96ST8 783 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 PPP1R16BQ96T49 567 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 UPF3AQ9H1J1 476 aaKnown RBP13.95□□□□□ -0.18
PMS1-204ENST00000409823 HBP1O60381 514 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 FAM13AO94988 1023 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 MYL1P05976 194 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 MORC3Q14149 939 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 HIC1Q14526 733 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 FBXO46Q6PJ61 603 aaPredicted RBP13.95□□□□□ -0.18
PMS1-204ENST00000409823 RNF180Q86T96 592 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 KIFC3Q9BVG8 833 aa13.95□□□□□ -0.18
PMS1-204ENST00000409823 DGAT1O75907 488 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 SMIM10L2AP0DMW4 78 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 SMIM10L2BP0DMW5 78 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 PSEN2P49810 448 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 ZNF445P59923 1031 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 MAPK7Q13164 816 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 GRIK4Q16099 956 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 FAM47CQ5HY64 1035 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 KSR1Q8IVT5 923 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 CCDC65Q8IXS2 484 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 KLHDC9Q8NEP7 349 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 ATP6V0A4Q9HBG4 840 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 KIAA0100Q14667 2235 aaKnown RBP13.94□□□□□ -0.18
PMS1-204ENST00000409823 CD44P16070 742 aaKnown RBP13.94□□□□□ -0.18
PMS1-204ENST00000409823 GUCY2CP25092 1073 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 KLRC1P26715 233 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 CLCN3P51790 818 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 CASP5P51878 434 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 ODR4Q5SWX8 454 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 KIAA0895Q8NCT3 520 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 LMBR1Q8WVP7 490 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 DHX33Q9H6R0 707 aaKnown RBP13.94□□□□□ -0.18
PMS1-204ENST00000409823 PARVGQ9HBI0 331 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 MSCO60682 206 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 RHOBTB3O94955 611 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 NMT1P30419 496 aaKnown RBP13.94□□□□□ -0.18
PMS1-204ENST00000409823 PEX3P56589 373 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 NLRP12P59046 1061 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 STX1AQ16623 288 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 NBPF20Q3BBV1 942 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 CCSAPQ6IQ19 270 aaPredicted RBP13.94□□□□□ -0.18
PMS1-204ENST00000409823 C7orf31Q8N865 590 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 TSPY26PQ9H489 355 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 MRPL44Q9H9J2 332 aaKnown RBP13.94□□□□□ -0.18
PMS1-204ENST00000409823 PAK6Q9NQU5 681 aaPredicted RBP13.94□□□□□ -0.18
PMS1-204ENST00000409823 HDAC6Q9UBN7 1215 aa13.94□□□□□ -0.18
PMS1-204ENST00000409823 MKRN4PQ13434 485 aaPredicted RBP13.93□□□□□ -0.18
PMS1-204ENST00000409823 MARCH8Q5T0T0 291 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 EFCAB12Q6NXP0 572 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 BSNDQ8WZ55 320 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 MTG1Q9BT17 334 aaPredicted RBP13.93□□□□□ -0.18
PMS1-204ENST00000409823 POLR3FQ9H1D9 316 aaPredicted RBP13.93□□□□□ -0.18
PMS1-204ENST00000409823 PDLIM7Q9NR12 457 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 RMND1Q9NWS8 449 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 KCND2Q9NZV8 630 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 COL4A3BPQ9Y5P4 624 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 PVALEFA0A1B0GWK0 134 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 CCDC169A6NNP5 214 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 ZEB2O60315 1214 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 MAFO75444 373 aaPredicted RBP13.93□□□□□ -0.18
PMS1-204ENST00000409823 PRCPP42785 496 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 ACLYP53396 1101 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 ZC2HC1CQ53FD0 456 aaPredicted RBP13.93□□□□□ -0.18
PMS1-204ENST00000409823 FAM26FQ5R3K3 315 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 ZNF658Q5TYW1 1059 aaPredicted RBP13.93□□□□□ -0.18
PMS1-204ENST00000409823 EEF2KMTQ96G04 330 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 ZNF333Q96JL9 665 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 ANP32EQ9BTT0 268 aa13.93□□□□□ -0.18
PMS1-204ENST00000409823 FRMD3A2A2Y4 597 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 C22orf31O95567 290 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 MYBP10242 640 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 STX17P56962 302 aa13.92□□□□□ -0.18
PMS1-204ENST00000409823 KCNA1Q09470 495 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms