RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 MYBL1P10243 752 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 KRT33BQ14525 404 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 CERKLQ49MI3 558 aaPredicted RBP12.95□□□□□ -0.34
SHANK2-203ENST00000409161 DNAL1Q4LDG9 190 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 ABI1Q8IZP0 508 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 GCNAQ96QF7 691 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 CCDC90BQ9GZT6 254 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 LSG1Q9H089 658 aaKnown RBP12.95□□□□□ -0.34
SHANK2-203ENST00000409161 SH3GLB2Q9NR46 395 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 MAN1B1Q9UKM7 699 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 TSC22D4Q9Y3Q8 395 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 ZNF711Q9Y462 761 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 DIAPH2O60879 1101 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 PDIA3P30101 505 aaKnown RBP12.95□□□□□ -0.34
SHANK2-203ENST00000409161 NR5A1Q13285 461 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 ORC2Q13416 577 aaPredicted RBP12.95□□□□□ -0.34
SHANK2-203ENST00000409161 SYDE1Q6ZW31 735 aaPredicted RBP12.95□□□□□ -0.34
SHANK2-203ENST00000409161 ABCF3Q9NUQ8 709 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 PMS1P54277 932 aaKnown RBP12.95□□□□□ -0.34
SHANK2-203ENST00000409161 RUNX1T1Q06455 604 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 ATP11CQ8NB49 1132 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 ATP6V1G3Q96LB4 118 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 TAF1DQ9H5J8 278 aaPredicted RBP12.95□□□□□ -0.34
SHANK2-203ENST00000409161 CEP72Q9P209 647 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 NEURL1BA8MQ27 555 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 RSPH10B2B2RC85 870 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 MFAP3LO75121 409 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 RSPH10BP0C881 870 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 RAD23BP54727 409 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 UBE3CQ15386 1083 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 NAALADL2Q58DX5 795 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 TTC17Q96AE7 1141 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 DHX34Q14147 1143 aaKnown RBP12.95□□□□□ -0.34
SHANK2-203ENST00000409161 ZNF827Q17R98 1081 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 IRAK4Q9NWZ3 460 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 SYNJ2BP-COX16A0A087WUM0 186 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 ADCY3O60266 1144 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 GFPT2O94808 682 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 HOXC9P31274 260 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 GGCXP38435 758 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 TUBGCP3Q96CW5 907 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 CMTM5Q96DZ9 223 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 ZNF577Q9BSK1 485 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 WWP1Q9H0M0 922 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 COX16Q9P0S2 106 aa12.95□□□□□ -0.34
SHANK2-203ENST00000409161 KRT7P08729 469 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 MAGOHP61326 146 aaKnown RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 CDR2LQ86X02 465 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 C19orf60Q96EN9 201 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 SNF8Q96H20 258 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 SLITRK6Q9H5Y7 841 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 NLRP11P59045 1033 aaKnown RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 TAP1Q03518 808 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 VIPAS39Q9H9C1 493 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 SAYSD1Q9NPB0 183 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 PNMA6EA0A0J9YXQ4 647 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 ZAP70P43403 619 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 DYNLT1P63172 113 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 RASSF3Q86WH2 238 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 SSH3Q8TE77 659 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 TADA1Q96BN2 335 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 CNBD2Q96M20 576 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 CCND2P30279 289 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 GOLGA8FQ08AF8 430 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 GOLGA8DPQ0D2H9 430 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 DLGAP5Q15398 846 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 BBS9Q3SYG4 887 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 KIAA1755Q5JYT7 1200 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 LUZP2Q86TE4 346 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 TMEM245Q9H330 911 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 SUGCTQ9HAC7 445 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 ETNK1Q9HBU6 452 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 KIAA1586Q9HCI6 787 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 SRPRBQ9Y5M8 271 aaKnown RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 PPP1R2P1Q96PQ5 205 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 SMG5Q9UPR3 1016 aaKnown RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 ICA1Q05084 483 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 CCDC85BQ15834 202 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 PRUNE1Q86TP1 453 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 CEP95Q96GE4 821 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 WNT8AQ9H1J5 351 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 NDST4Q9H3R1 872 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 ERBB4Q15303 1308 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 MMP1P03956 469 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 MRPS35P82673 323 aaKnown RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 TRIM72Q6ZMU5 477 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 NLRP14Q86W24 1093 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 TRIM69Q86WT6 500 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 FAM149B1Q96BN6 582 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 ALKBH8Q96BT7 664 aaKnown RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 OSBPL9Q96SU4 736 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 RNF123Q5XPI4 1314 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 RPAP1Q9BWH6 1393 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 BTBD18B2RXH4 712 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 CIAO1O76071 339 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 LDHAP00338 332 aaKnown RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 EPHB1P54762 984 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 KIF23Q02241 960 aaPredicted RBP12.94□□□□□ -0.34
SHANK2-203ENST00000409161 EFHBQ8N7U6 833 aa12.94□□□□□ -0.34
SHANK2-203ENST00000409161 EPN3Q9H201 632 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms