RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SWSAP1Q6NVH7 229 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 SFR1Q86XK3 245 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 FAM114A1Q8IWE2 563 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 FBXO16Q8IX29 292 aaPredicted RBP23.23■■□□□ 1.31
TPM1-208ENST00000404484 XPO4Q9C0E2 1151 aaKnown RBP23.23■■□□□ 1.31
TPM1-208ENST00000404484 MLXIPQ9HAP2 919 aa23.23■■□□□ 1.31
TPM1-208ENST00000404484 SYNGAP1Q96PV0 1343 aa23.22■■□□□ 1.31
TPM1-208ENST00000404484 DOCK5Q9H7D0 1870 aa23.22■■□□□ 1.31
TPM1-208ENST00000404484 ZNF131P52739 623 aa23.22■■□□□ 1.31
TPM1-208ENST00000404484 FAM160B1Q5W0V3 765 aa23.22■■□□□ 1.31
TPM1-208ENST00000404484 STXBP4Q6ZWJ1 553 aa23.22■■□□□ 1.31
TPM1-208ENST00000404484 NRBP1Q9UHY1 535 aa23.22■■□□□ 1.31
TPM1-208ENST00000404484 SEPT4O43236 478 aa23.21■■□□□ 1.31
TPM1-208ENST00000404484 ZNF865P0CJ78 1059 aaPredicted RBP23.21■■□□□ 1.31
TPM1-208ENST00000404484 MNX1P50219 401 aaPredicted RBP23.21■■□□□ 1.31
TPM1-208ENST00000404484 XKR9Q5GH70 373 aa23.21■■□□□ 1.31
TPM1-208ENST00000404484 XKR3Q5GH77 459 aa23.21■■□□□ 1.31
TPM1-208ENST00000404484 CELF3Q5SZQ8 465 aaKnown RBP23.21■■□□□ 1.31
TPM1-208ENST00000404484 CCDC60Q8IWA6 550 aaPredicted RBP23.21■■□□□ 1.31
TPM1-208ENST00000404484 CSGALNACT2Q8N6G5 542 aa23.21■■□□□ 1.31
TPM1-208ENST00000404484 SEPT1Q8WYJ6 367 aa23.21■■□□□ 1.31
TPM1-208ENST00000404484 BCAS3Q9H6U6 928 aa23.21■■□□□ 1.31
TPM1-208ENST00000404484 ZNF302Q9NR11 478 aa23.21■■□□□ 1.31
TPM1-208ENST00000404484 TRIM49BA6NDI0 452 aa23.2■■□□□ 1.3
TPM1-208ENST00000404484 LY6KQ17RY6 165 aa23.2■■□□□ 1.3
TPM1-208ENST00000404484 FILIP1LQ4L180 1135 aa23.2■■□□□ 1.3
TPM1-208ENST00000404484 CCDC62Q6P9F0 684 aa23.2■■□□□ 1.3
TPM1-208ENST00000404484 MYCT1Q8N699 235 aa23.2■■□□□ 1.3
TPM1-208ENST00000404484 MRPL44Q9H9J2 332 aaKnown RBP23.2■■□□□ 1.3
TPM1-208ENST00000404484 TBC1D7Q9P0N9 293 aa23.2■■□□□ 1.3
TPM1-208ENST00000404484 MAGEC2Q9UBF1 373 aaPredicted RBP23.2■■□□□ 1.3
TPM1-208ENST00000404484 WDR81Q562E7 1941 aa23.2■■□□□ 1.3
TPM1-208ENST00000404484 MCM3APO60318 1980 aa23.2■■□□□ 1.3
TPM1-208ENST00000404484 IGKV6D-21A0A0A0MT36 114 aa23.19■■□□□ 1.3
TPM1-208ENST00000404484 RSPH10B2B2RC85 870 aa23.19■■□□□ 1.3
TPM1-208ENST00000404484 MSCO60682 206 aa23.19■■□□□ 1.3
TPM1-208ENST00000404484 RSPH10BP0C881 870 aa23.19■■□□□ 1.3
TPM1-208ENST00000404484 TXNP10599 105 aaKnown RBP23.19■■□□□ 1.3
TPM1-208ENST00000404484 EEF1GP26641 437 aaKnown RBP23.19■■□□□ 1.3
TPM1-208ENST00000404484 PMS1P54277 932 aaKnown RBP23.19■■□□□ 1.3
TPM1-208ENST00000404484 PRKCEQ02156 737 aa23.19■■□□□ 1.3
TPM1-208ENST00000404484 ANKRD40Q6AI12 368 aa23.19■■□□□ 1.3
TPM1-208ENST00000404484 PPP4R3CPQ6ZMV5 832 aa23.19■■□□□ 1.3
TPM1-208ENST00000404484 DIS3LQ8TF46 1054 aaKnown RBP23.19■■□□□ 1.3
TPM1-208ENST00000404484 DRC1Q96MC2 740 aa23.19■■□□□ 1.3
TPM1-208ENST00000404484 SEMA6BQ9H3T3 888 aa23.19■■□□□ 1.3
TPM1-208ENST00000404484 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.19■■□□□ 1.3
TPM1-208ENST00000404484 MAFBQ9Y5Q3 323 aaPredicted RBP23.19■■□□□ 1.3
TPM1-208ENST00000404484 UBE4BO95155 1302 aa23.19■■□□□ 1.3
TPM1-208ENST00000404484 NOP56O00567 594 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 EIF3DO15371 548 aaKnown RBP eCLIP23.18■■□□□ 1.3
TPM1-208ENST00000404484 ZNF862O60290 1169 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 SORBS3O60504 671 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 HIP1RO75146 1068 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 ARIH2O95376 493 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 LRRC41Q15345 812 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 HSP90AA4PQ58FG1 418 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 UTP14CQ5TAP6 766 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 DHX37Q8IY37 1157 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 ANKLE1Q8NAG6 615 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 SPC24Q8NBT2 197 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 PAWRQ96IZ0 340 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 DUSP9Q99956 384 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 SRRTQ9BXP5 876 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 LARSQ9P2J5 1176 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 LIMA1Q9UHB6 759 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 MYH9P35579 1960 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 GSTTP1A0A1W2PQM5 241 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 RBM47A0AV96 593 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 KCNJ18B7U540 433 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 USO1O60763 962 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 MAPTP10636 758 aaKnown RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 KCNJ12Q14500 433 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 BMT2Q1RMZ1 405 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 TCP11X2Q5H9J9 407 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 ANO5Q75V66 913 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 EPM2AIP1Q7L775 607 aaPredicted RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 FAM178BQ8IXR5 827 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 SLC17A8Q8NDX2 589 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 AFAP1L1Q8TED9 768 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 SCFD1Q8WVM8 642 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 CEP170P1Q96L14 293 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 AZI2Q9H6S1 392 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 IMPACTQ9P2X3 320 aa23.18■■□□□ 1.3
TPM1-208ENST00000404484 SEPT9Q9UHD8 586 aaPredicted RBP23.18■■□□□ 1.3
TPM1-208ENST00000404484 OATP04181 439 aa23.17■■□□□ 1.3
TPM1-208ENST00000404484 ACVR2BQ13705 512 aa23.17■■□□□ 1.3
TPM1-208ENST00000404484 ALCAMQ13740 583 aa23.17■■□□□ 1.3
TPM1-208ENST00000404484 MCPH1Q8NEM0 835 aa23.17■■□□□ 1.3
TPM1-208ENST00000404484 FAM167AQ96KS9 214 aa23.17■■□□□ 1.3
TPM1-208ENST00000404484 KATNBL1Q9H079 304 aa23.17■■□□□ 1.3
TPM1-208ENST00000404484 ABHD16BQ9H3Z7 469 aa23.17■■□□□ 1.3
TPM1-208ENST00000404484 A0A1B0GTH6 734 aa23.16■■□□□ 1.3
TPM1-208ENST00000404484 DGAT1O75907 488 aa23.16■■□□□ 1.3
TPM1-208ENST00000404484 STBD1O95210 358 aa23.16■■□□□ 1.3
TPM1-208ENST00000404484 GCNT3O95395 438 aa23.16■■□□□ 1.3
TPM1-208ENST00000404484 TPM2P07951 284 aa23.16■■□□□ 1.3
TPM1-208ENST00000404484 MAPK7Q13164 816 aa23.16■■□□□ 1.3
TPM1-208ENST00000404484 LAMC2Q13753 1193 aa23.16■■□□□ 1.3
TPM1-208ENST00000404484 ODR4Q5SWX8 454 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms