RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 PLPP4Q5VZY2 271 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 TRIM67Q6ZTA4 783 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 SLC24A5Q71RS6 500 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 NIPA1Q7RTP0 329 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 THNSL1Q8IYQ7 743 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 CRYGNQ8WXF5 182 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 RPGRIP1Q96KN7 1286 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 C1orf112Q9NSG2 853 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 VPS13AQ96RL7 3174 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 PLXNA3P51805 1871 aa13.55□□□□□ -0.24
LINC00544-201ENST00000400540 hCG_1984214I3L0E3 225 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 IPO5O00410 1097 aaKnown RBP13.54□□□□□ -0.24
LINC00544-201ENST00000400540 GPR182O15218 404 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 GPR32O75388 356 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 CLCN3P51790 818 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 UBE3AQ05086 875 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 DSC3Q14574 896 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 MIS18BP1Q6P0N0 1132 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 LRRC55Q6ZSA7 311 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 CKAP2LQ8IYA6 745 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 ZNF713Q8N859 430 aaPredicted RBP13.54□□□□□ -0.24
LINC00544-201ENST00000400540 SUSD6Q92537 303 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 PBXIP1Q96AQ6 731 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 ZNF577Q9BSK1 485 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 APOL5Q9BWW9 433 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 PHF7Q9BWX1 381 aaPredicted RBP13.54□□□□□ -0.24
LINC00544-201ENST00000400540 AAASQ9NRG9 546 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 RNF19AQ9NV58 838 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 CDH22Q9UJ99 828 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 MYO10Q9HD67 2058 aa13.54□□□□□ -0.24
LINC00544-201ENST00000400540 C2orf16Q68DN1 1984 aa13.53□□□□□ -0.24
LINC00544-201ENST00000400540 HIDE1A8MVS5 230 aa13.53□□□□□ -0.24
LINC00544-201ENST00000400540 CPA1P15085 419 aa13.53□□□□□ -0.24
LINC00544-201ENST00000400540 SP100P23497 879 aaPredicted RBP13.53□□□□□ -0.24
LINC00544-201ENST00000400540 ADD1P35611 737 aaKnown RBP13.53□□□□□ -0.24
LINC00544-201ENST00000400540 CRYBB1P53674 252 aaPredicted RBP13.53□□□□□ -0.24
LINC00544-201ENST00000400540 PFKFB3Q16875 520 aaPredicted RBP13.53□□□□□ -0.24
LINC00544-201ENST00000400540 LLGL2Q6P1M3 1020 aa13.53□□□□□ -0.24
LINC00544-201ENST00000400540 DHX32Q7L7V1 743 aaKnown RBP13.53□□□□□ -0.24
LINC00544-201ENST00000400540 BMP8AQ7Z5Y6 402 aa13.53□□□□□ -0.24
LINC00544-201ENST00000400540 METTL13Q8N6R0 699 aa13.53□□□□□ -0.24
LINC00544-201ENST00000400540 BBXQ8WY36 941 aaPredicted RBP13.53□□□□□ -0.24
LINC00544-201ENST00000400540 ZNF668Q96K58 619 aaPredicted RBP13.53□□□□□ -0.24
LINC00544-201ENST00000400540 ATP6V0A4Q9HBG4 840 aa13.53□□□□□ -0.24
LINC00544-201ENST00000400540 TMEM161AQ9NX61 479 aa13.53□□□□□ -0.24
LINC00544-201ENST00000400540 NAP1L2Q9ULW6 460 aaPredicted RBP13.53□□□□□ -0.24
LINC00544-201ENST00000400540 MAFBQ9Y5Q3 323 aaPredicted RBP13.53□□□□□ -0.24
LINC00544-201ENST00000400540 ZDBF2Q9HCK1 2354 aa13.53□□□□□ -0.24
LINC00544-201ENST00000400540 ARID2Q68CP9 1835 aa13.53□□□□□ -0.24
LINC00544-201ENST00000400540 CYP3A4P08684 503 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 LAG3P18627 525 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 TECP42680 631 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 FAM189BP81408 668 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 KCNC3Q14003 757 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 ZNF746Q6NUN9 644 aaPredicted RBP13.52□□□□□ -0.25
LINC00544-201ENST00000400540 TEX2Q8IWB9 1127 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 LRRC71Q8N4P6 559 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 LINC01465Q8N7H1 131 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 RASGRP4Q8TDF6 673 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 MRPS27Q92552 414 aaKnown RBP13.52□□□□□ -0.25
LINC00544-201ENST00000400540 CASD1Q96PB1 797 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 TCF25Q9BQ70 676 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 GLT8D2Q9H1C3 349 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 ENTPD7Q9NQZ7 604 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 GABBR1Q9UBS5 961 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 AKT3Q9Y243 479 aa13.52□□□□□ -0.25
LINC00544-201ENST00000400540 ATF7P17544 494 aaPredicted RBP13.51□□□□□ -0.25
LINC00544-201ENST00000400540 FGFR4P22455 802 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 METAP2P50579 478 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC00544-201ENST00000400540 VCPP55072 806 aaKnown RBP13.51□□□□□ -0.25
LINC00544-201ENST00000400540 NLRP11P59045 1033 aaKnown RBP13.51□□□□□ -0.25
LINC00544-201ENST00000400540 TCF15Q12870 199 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 PKN1Q16512 942 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 PRR16Q569H4 304 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 ODR4Q5SWX8 454 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 EFCAB12Q6NXP0 572 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 ANKRD54Q6NXT1 300 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 SYCE2Q6PIF2 218 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 LENG9Q96B70 501 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 ASIC4Q96FT7 647 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 CDCA3Q99618 268 aaPredicted RBP13.51□□□□□ -0.25
LINC00544-201ENST00000400540 ZMYND12Q9H0C1 365 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 TMEM117Q9H0C3 514 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 S1PR5Q9H228 398 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 ADAMTS10Q9H324 1103 aa13.51□□□□□ -0.25
LINC00544-201ENST00000400540 ELAC1Q9H777 363 aaKnown RBP13.51□□□□□ -0.25
LINC00544-201ENST00000400540 ZNF862O60290 1169 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 PSAPP07602 524 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 SETQ01105 290 aaPredicted RBP13.5□□□□□ -0.25
LINC00544-201ENST00000400540 PLCB3Q01970 1234 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 SIGLEC14Q08ET2 396 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 UGCGQ16739 394 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 CLLU1OSQ5K130 101 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 KCNT2Q6UVM3 1135 aa13.5□□□□□ -0.25
LINC00544-201ENST00000400540 SUGP1Q8IWZ8 645 aaKnown RBP13.5□□□□□ -0.25
LINC00544-201ENST00000400540 SMAP1Q8IYB5 467 aaPredicted RBP13.5□□□□□ -0.25
LINC00544-201ENST00000400540 REXO1Q8N1G1 1221 aaKnown RBP13.5□□□□□ -0.25
LINC00544-201ENST00000400540 FBXL6Q8N531 539 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms