RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 NME9Q86XW9 330 aa8.93□□□□□ -0.98
CHD8-201ENST00000399982 CLMNQ96JQ2 1002 aa8.93□□□□□ -0.98
CHD8-201ENST00000399982 ADPGKQ9BRR6 497 aa8.93□□□□□ -0.98
CHD8-201ENST00000399982 ROPN1BQ9BZX4 212 aaPredicted RBP8.93□□□□□ -0.98
CHD8-201ENST00000399982 MLXIPQ9HAP2 919 aa8.93□□□□□ -0.98
CHD8-201ENST00000399982 ROPN1Q9HAT0 212 aaPredicted RBP8.93□□□□□ -0.98
CHD8-201ENST00000399982 SLC5A4Q9NY91 659 aa8.93□□□□□ -0.98
CHD8-201ENST00000399982 MED23Q9ULK4 1368 aa8.93□□□□□ -0.98
CHD8-201ENST00000399982 SMAPO00193 183 aa8.93□□□□□ -0.98
CHD8-201ENST00000399982 MAGOHP61326 146 aaKnown RBP8.93□□□□□ -0.98
CHD8-201ENST00000399982 DPCR1Q3MIW9 517 aa8.93□□□□□ -0.98
CHD8-201ENST00000399982 GCOM2Q9BZD3 368 aaPredicted RBP8.93□□□□□ -0.98
CHD8-201ENST00000399982 PRDM5Q9NQX1 630 aaPredicted RBP8.93□□□□□ -0.98
CHD8-201ENST00000399982 USE1Q9NZ43 259 aa8.93□□□□□ -0.98
CHD8-201ENST00000399982 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.93□□□□□ -0.98
CHD8-201ENST00000399982 TCOF1Q13428 1488 aaKnown RBP8.93□□□□□ -0.98
CHD8-201ENST00000399982 KIF23Q02241 960 aaPredicted RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 PRKCQQ04759 706 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 MXD4Q14582 209 aaPredicted RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 TRADDQ15628 312 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 RNF219Q5W0B1 726 aaPredicted RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 TLK2Q86UE8 772 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 NYXQ9GZU5 481 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 ERBB4Q15303 1308 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 A0A1W2PQC6 194 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 RASA4BC9J798 803 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 COPEO14579 308 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 RASA4O43374 803 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 CCNE1P24864 410 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 MORF4L2Q15014 288 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 FAM173BQ6P4H8 233 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 LINC00301Q8NCQ3 95 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 FTOQ9C0B1 505 aaKnown RBP eCLIP8.92□□□□□ -0.98
CHD8-201ENST00000399982 RPAP3Q9H6T3 665 aaPredicted RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 KDRP35968 1356 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 DYTNA2CJ06 578 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 AFPP02771 609 aaKnown RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 INPP5AQ14642 412 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 TRIM16LQ309B1 348 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 Q3C1V9 767 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 ADCK5Q3MIX3 580 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 C11orf57Q6ZUT1 292 aaPredicted RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 CADPS2Q86UW7 1296 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 METTL23Q86XA0 190 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 FRMD6Q96NE9 622 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 FAM167BQ9BTA0 163 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 RNF26Q9BY78 433 aaPredicted RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 KLHL31Q9H511 634 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 SMYD3Q9H7B4 428 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 NSFL1CQ9UNZ2 370 aaKnown RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 SHANK2Q9UPX8 1470 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 CCT8L1PA6NM43 557 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 GPAA1O43292 621 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 TFCP2Q12800 502 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 ORC2Q13416 577 aaPredicted RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 ADAM9Q13443 819 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 SKIV2LQ15477 1246 aaKnown RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 UNC45BQ8IWX7 931 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 CCDC127Q96BQ5 260 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 OTUB1Q96FW1 271 aaPredicted RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 PARVGQ9HBI0 331 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 SYCP2Q9BX26 1530 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 O00370 1275 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 ENC1O14682 589 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 PER1O15534 1290 aaPredicted RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 CAPN1P07384 714 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 NUP62P37198 522 aaPredicted RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 PMS2P54278 862 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 TRPM8Q7Z2W7 1104 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 TRIM69Q86WT6 500 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 SSH3Q8TE77 659 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 TFCP2L1Q9NZI6 479 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 PITPNM2Q9BZ72 1349 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 TBC1D12O60347 775 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 SNX2O60749 519 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 SUPT3HO75486 399 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 SNAP25P60880 206 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 TRIM32Q13049 653 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 LBRQ14739 615 aaKnown RBP8.92□□□□□ -0.98
CHD8-201ENST00000399982 BLIDQ8IZY5 108 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 XAGE3Q8WTP9 111 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 VMP1Q96GC9 406 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 BRD8Q9H0E9 1235 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 KDM4CQ9H3R0 1056 aa8.92□□□□□ -0.98
CHD8-201ENST00000399982 NIP7Q9Y221 180 aaKnown RBP eCLIP8.92□□□□□ -0.983e-20■■■■■ 33.4
CHD8-201ENST00000399982 RNF103-CHMP3A0A140T963 221 aa8.91□□□□□ -0.98
CHD8-201ENST00000399982 SRRM3A6NNA2 597 aaPredicted RBP8.91□□□□□ -0.98
CHD8-201ENST00000399982 WDR64B1ANS9 1081 aa8.91□□□□□ -0.98
CHD8-201ENST00000399982 NEMP1O14524 444 aa8.91□□□□□ -0.98
CHD8-201ENST00000399982 JAK2O60674 1132 aa8.91□□□□□ -0.98
CHD8-201ENST00000399982 DLATP10515 647 aaKnown RBP8.91□□□□□ -0.98
CHD8-201ENST00000399982 TMOD1P28289 359 aa8.91□□□□□ -0.98
CHD8-201ENST00000399982 CTCFP49711 727 aaPredicted RBP8.91□□□□□ -0.98
CHD8-201ENST00000399982 BFSP2Q13515 415 aa8.91□□□□□ -0.98
CHD8-201ENST00000399982 E4F1Q66K89 784 aaPredicted RBP8.91□□□□□ -0.98
CHD8-201ENST00000399982 TMEM245Q9H330 911 aa8.91□□□□□ -0.98
CHD8-201ENST00000399982 RAD21L1Q9H4I0 556 aa8.91□□□□□ -0.98
CHD8-201ENST00000399982 TMEM191CA6NGB0 347 aa8.91□□□□□ -0.98
CHD8-201ENST00000399982 TMEM191BP0C7N4 346 aa8.91□□□□□ -0.98
CHD8-201ENST00000399982 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms